Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | C2740_RS09315 | Genome accession | NZ_CP061304 |
| Coordinates | 1811331..1812005 (+) | Length | 224 a.a. |
| NCBI ID | WP_215293407.1 | Uniprot ID | - |
| Organism | Polynucleobacter sp. MG-5-Ahmo-C2 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1806331..1817005
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2740_RS09290 (C2740_09290) | - | 1806971..1807552 (-) | 582 | WP_215293402.1 | DUF4390 domain-containing protein | - |
| C2740_RS09295 (C2740_09295) | rsmB | 1807549..1808865 (-) | 1317 | WP_215293403.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| C2740_RS09300 (C2740_09300) | htpX | 1808858..1809733 (-) | 876 | WP_215293404.1 | zinc metalloprotease HtpX | - |
| C2740_RS09305 (C2740_09305) | fmt | 1809736..1810734 (-) | 999 | WP_215293405.1 | methionyl-tRNA formyltransferase | - |
| C2740_RS09310 (C2740_09310) | def | 1810744..1811259 (-) | 516 | WP_215293406.1 | peptide deformylase | - |
| C2740_RS09315 (C2740_09315) | dprA | 1811331..1812005 (+) | 675 | WP_215293407.1 | DNA-processing protein DprA | Machinery gene |
| C2740_RS09320 (C2740_09320) | - | 1812228..1814891 (+) | 2664 | WP_215293408.1 | DNA topoisomerase III | - |
| C2740_RS09425 | mnmC | 1814951..1815952 (-) | 1002 | Protein_1826 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
Sequence
Protein
Download Length: 224 a.a. Molecular weight: 23974.04 Da Isoelectric Point: 9.1335
>NTDB_id=481722 C2740_RS09315 WP_215293407.1 1811331..1812005(+) (dprA) [Polynucleobacter sp. MG-5-Ahmo-C2]
MLQFPKSKHIARITLGDKNYPPRLNDLYDPPKHLYIDGNPDLLQMPMVAIVGSRKASAEGLKNTALFAEELSRAGLLIIS
GLARGVDGAAHKAILSLGPKHLTMAVCGTGLDIVYPEEHLDLASSIRQHGLLVSELPLGAPPRSCHFPRRNRIIAALSLG
VLVIEAAERSGSLITARLAGELGREVFAVPGAIGHPLSGGCNLLIQQGAKLARKPRDVLEELIF
MLQFPKSKHIARITLGDKNYPPRLNDLYDPPKHLYIDGNPDLLQMPMVAIVGSRKASAEGLKNTALFAEELSRAGLLIIS
GLARGVDGAAHKAILSLGPKHLTMAVCGTGLDIVYPEEHLDLASSIRQHGLLVSELPLGAPPRSCHFPRRNRIIAALSLG
VLVIEAAERSGSLITARLAGELGREVFAVPGAIGHPLSGGCNLLIQQGAKLARKPRDVLEELIF
Nucleotide
Download Length: 675 bp
>NTDB_id=481722 C2740_RS09315 WP_215293407.1 1811331..1812005(+) (dprA) [Polynucleobacter sp. MG-5-Ahmo-C2]
ATGCTCCAATTCCCAAAGTCAAAGCACATCGCCAGAATTACGCTAGGCGATAAAAATTACCCGCCACGTCTGAATGATTT
ATACGATCCCCCCAAGCATCTATATATAGATGGAAATCCCGACTTGCTCCAAATGCCCATGGTTGCAATAGTGGGCTCTC
GCAAAGCTAGCGCTGAGGGCCTTAAAAATACCGCTTTGTTTGCTGAGGAGCTATCGCGAGCCGGCTTACTCATCATTTCG
GGGCTTGCAAGAGGGGTTGATGGCGCCGCCCACAAAGCCATCCTGAGCCTAGGCCCCAAGCACCTCACCATGGCAGTCTG
CGGGACCGGACTTGATATTGTTTACCCCGAAGAACATCTTGATTTAGCAAGCAGCATTAGGCAGCACGGGCTTTTAGTCT
CAGAGCTTCCCTTAGGGGCGCCCCCAAGATCATGTCACTTTCCCAGGCGCAATCGAATTATTGCTGCGTTATCGCTCGGC
GTGCTCGTGATTGAGGCAGCCGAAAGATCAGGCTCTCTGATTACTGCACGCCTAGCTGGAGAGCTGGGAAGGGAGGTTTT
TGCAGTGCCGGGAGCTATTGGACACCCCCTTTCTGGCGGCTGTAACCTCCTGATACAGCAAGGCGCGAAGCTCGCAAGAA
AACCTAGAGACGTCTTGGAGGAGTTAATTTTTTGA
ATGCTCCAATTCCCAAAGTCAAAGCACATCGCCAGAATTACGCTAGGCGATAAAAATTACCCGCCACGTCTGAATGATTT
ATACGATCCCCCCAAGCATCTATATATAGATGGAAATCCCGACTTGCTCCAAATGCCCATGGTTGCAATAGTGGGCTCTC
GCAAAGCTAGCGCTGAGGGCCTTAAAAATACCGCTTTGTTTGCTGAGGAGCTATCGCGAGCCGGCTTACTCATCATTTCG
GGGCTTGCAAGAGGGGTTGATGGCGCCGCCCACAAAGCCATCCTGAGCCTAGGCCCCAAGCACCTCACCATGGCAGTCTG
CGGGACCGGACTTGATATTGTTTACCCCGAAGAACATCTTGATTTAGCAAGCAGCATTAGGCAGCACGGGCTTTTAGTCT
CAGAGCTTCCCTTAGGGGCGCCCCCAAGATCATGTCACTTTCCCAGGCGCAATCGAATTATTGCTGCGTTATCGCTCGGC
GTGCTCGTGATTGAGGCAGCCGAAAGATCAGGCTCTCTGATTACTGCACGCCTAGCTGGAGAGCTGGGAAGGGAGGTTTT
TGCAGTGCCGGGAGCTATTGGACACCCCCTTTCTGGCGGCTGTAACCTCCTGATACAGCAAGGCGCGAAGCTCGCAAGAA
AACCTAGAGACGTCTTGGAGGAGTTAATTTTTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.