Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | GQ367_RS08560 | Genome accession | NZ_CP061299 |
| Coordinates | 1692746..1693351 (+) | Length | 201 a.a. |
| NCBI ID | WP_251370164.1 | Uniprot ID | - |
| Organism | Polynucleobacter sp. MWH-CaK5 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1687746..1698351
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQ367_RS08535 (GQ367_08515) | - | 1688233..1688853 (-) | 621 | WP_215290532.1 | DUF4390 domain-containing protein | - |
| GQ367_RS08540 (GQ367_08520) | rsmB | 1688876..1690114 (-) | 1239 | WP_215290533.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| GQ367_RS08545 (GQ367_08525) | htpX | 1690167..1691027 (-) | 861 | WP_215290534.1 | zinc metalloprotease HtpX | - |
| GQ367_RS08550 (GQ367_08530) | fmt | 1691123..1692103 (-) | 981 | WP_215290535.1 | methionyl-tRNA formyltransferase | - |
| GQ367_RS08555 (GQ367_08535) | def | 1692103..1692612 (-) | 510 | WP_215290536.1 | peptide deformylase | - |
| GQ367_RS08560 (GQ367_08540) | dprA | 1692746..1693351 (+) | 606 | WP_251370164.1 | DNA-processing protein DprA | Machinery gene |
| GQ367_RS08565 (GQ367_08545) | - | 1693482..1696094 (+) | 2613 | WP_215290538.1 | DNA topoisomerase III | - |
| GQ367_RS08635 | mnmC | 1696193..1697185 (-) | 993 | Protein_1678 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| GQ367_RS08570 (GQ367_08550) | - | 1697229..1698152 (+) | 924 | WP_215290539.1 | M23 family metallopeptidase | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 21657.08 Da Isoelectric Point: 8.1420
>NTDB_id=481700 GQ367_RS08560 WP_251370164.1 1692746..1693351(+) (dprA) [Polynucleobacter sp. MWH-CaK5]
MPDAPKEIYCQGNLEALQIPGLGIVGSRQASKEGVATAAYFAKAVVKQGLMVISGLAEGIDSAAHQGALQAQAQLSTIAI
CGTALDRCYPSKNQALFETIARQGLLISEYPPGTITKPHFFRQRNRLIAALSLGVLVVEAALKSGSLISAKYANDLGREV
FAIPHSIHQLQAMGCHQLIKEGAKLVERPEDIFEELRFFQK
MPDAPKEIYCQGNLEALQIPGLGIVGSRQASKEGVATAAYFAKAVVKQGLMVISGLAEGIDSAAHQGALQAQAQLSTIAI
CGTALDRCYPSKNQALFETIARQGLLISEYPPGTITKPHFFRQRNRLIAALSLGVLVVEAALKSGSLISAKYANDLGREV
FAIPHSIHQLQAMGCHQLIKEGAKLVERPEDIFEELRFFQK
Nucleotide
Download Length: 606 bp
>NTDB_id=481700 GQ367_RS08560 WP_251370164.1 1692746..1693351(+) (dprA) [Polynucleobacter sp. MWH-CaK5]
TTGCCTGATGCCCCTAAAGAAATTTACTGTCAGGGCAATCTTGAAGCGCTTCAAATACCCGGACTTGGCATCGTTGGCTC
TCGCCAAGCATCCAAAGAAGGGGTGGCAACGGCTGCTTATTTTGCAAAAGCGGTTGTTAAGCAAGGACTAATGGTCATTT
CAGGCTTGGCCGAAGGCATAGACTCAGCGGCCCACCAAGGCGCCCTGCAAGCCCAAGCACAGCTATCCACGATCGCAATT
TGCGGTACAGCCTTGGATCGGTGCTACCCCAGCAAAAACCAAGCTCTATTTGAGACCATTGCTCGTCAGGGTTTGCTGAT
TTCAGAATATCCCCCTGGCACGATCACCAAGCCCCACTTCTTTAGGCAAAGAAACCGGCTGATTGCCGCTTTGTCGCTAG
GGGTATTGGTTGTTGAGGCGGCGCTTAAGTCAGGCTCTTTAATAAGCGCGAAATATGCCAATGACCTGGGGCGAGAGGTG
TTTGCCATCCCCCATTCCATTCATCAACTCCAAGCCATGGGTTGTCACCAGCTCATCAAAGAAGGCGCCAAATTAGTAGA
GCGACCTGAGGATATATTTGAAGAATTAAGGTTTTTTCAAAAATAA
TTGCCTGATGCCCCTAAAGAAATTTACTGTCAGGGCAATCTTGAAGCGCTTCAAATACCCGGACTTGGCATCGTTGGCTC
TCGCCAAGCATCCAAAGAAGGGGTGGCAACGGCTGCTTATTTTGCAAAAGCGGTTGTTAAGCAAGGACTAATGGTCATTT
CAGGCTTGGCCGAAGGCATAGACTCAGCGGCCCACCAAGGCGCCCTGCAAGCCCAAGCACAGCTATCCACGATCGCAATT
TGCGGTACAGCCTTGGATCGGTGCTACCCCAGCAAAAACCAAGCTCTATTTGAGACCATTGCTCGTCAGGGTTTGCTGAT
TTCAGAATATCCCCCTGGCACGATCACCAAGCCCCACTTCTTTAGGCAAAGAAACCGGCTGATTGCCGCTTTGTCGCTAG
GGGTATTGGTTGTTGAGGCGGCGCTTAAGTCAGGCTCTTTAATAAGCGCGAAATATGCCAATGACCTGGGGCGAGAGGTG
TTTGCCATCCCCCATTCCATTCATCAACTCCAAGCCATGGGTTGTCACCAGCTCATCAAAGAAGGCGCCAAATTAGTAGA
GCGACCTGAGGATATATTTGAAGAATTAAGGTTTTTTCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.