Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | AOC06_RS08750 | Genome accession | NZ_CP061298 |
| Coordinates | 1660313..1660981 (+) | Length | 222 a.a. |
| NCBI ID | WP_215380275.1 | Uniprot ID | - |
| Organism | Polynucleobacter paludilacus strain MWH-Mekk-C3 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1655313..1665981
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOC06_RS08730 (AOC06_08730) | - | 1656849..1657430 (-) | 582 | WP_215380267.1 | DUF4390 domain-containing protein | - |
| AOC06_RS08735 (AOC06_08735) | rsmB | 1657427..1658785 (-) | 1359 | WP_255879958.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| AOC06_RS08740 (AOC06_08740) | fmt | 1658727..1659716 (-) | 990 | WP_215380269.1 | methionyl-tRNA formyltransferase | - |
| AOC06_RS08745 (AOC06_08745) | def | 1659720..1660241 (-) | 522 | WP_215380272.1 | peptide deformylase | - |
| AOC06_RS08750 (AOC06_08750) | dprA | 1660313..1660981 (+) | 669 | WP_215380275.1 | DNA-processing protein DprA | Machinery gene |
| AOC06_RS08755 (AOC06_08755) | - | 1661199..1663862 (+) | 2664 | WP_215380277.1 | DNA topoisomerase III | - |
| AOC06_RS08835 | mnmC | 1663835..1664941 (-) | 1107 | Protein_1708 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
Sequence
Protein
Download Length: 222 a.a. Molecular weight: 23442.39 Da Isoelectric Point: 9.8396
>NTDB_id=481686 AOC06_RS08750 WP_215380275.1 1660313..1660981(+) (dprA) [Polynucleobacter paludilacus strain MWH-Mekk-C3]
MRNKPSSAQIHRLSLGAPNYPKRLLDLADPPTTIYIAGKVELLSLPMVAIVGSRAPSQEGLRNAHCFAQALASSGLLVIS
GLAKGIDGVSHRAALSLSRPTLAICGTGLDLTYPPEHQTLAKEIWGNGLLLSELPLGVGPRAFHFPRRNRLIAALALGVL
VVEAAQRSGSLITARLALELGREVFAIPSSIHSPLSAGCHHLIGQGAKLVASPKEVLEELIY
MRNKPSSAQIHRLSLGAPNYPKRLLDLADPPTTIYIAGKVELLSLPMVAIVGSRAPSQEGLRNAHCFAQALASSGLLVIS
GLAKGIDGVSHRAALSLSRPTLAICGTGLDLTYPPEHQTLAKEIWGNGLLLSELPLGVGPRAFHFPRRNRLIAALALGVL
VVEAAQRSGSLITARLALELGREVFAIPSSIHSPLSAGCHHLIGQGAKLVASPKEVLEELIY
Nucleotide
Download Length: 669 bp
>NTDB_id=481686 AOC06_RS08750 WP_215380275.1 1660313..1660981(+) (dprA) [Polynucleobacter paludilacus strain MWH-Mekk-C3]
ATGAGAAACAAACCGAGCTCCGCACAAATTCACCGTCTATCTTTGGGCGCCCCCAATTACCCTAAACGCTTGCTTGACTT
GGCAGACCCTCCTACTACTATTTATATAGCTGGAAAAGTTGAATTGCTGAGTTTGCCGATGGTGGCAATTGTCGGCTCTC
GAGCCCCCAGTCAAGAGGGGCTTAGAAATGCCCACTGCTTTGCTCAGGCTCTGGCAAGCTCGGGTCTTCTGGTAATTTCA
GGGCTAGCTAAAGGCATTGATGGAGTCTCACATCGAGCAGCACTTAGTTTGAGCCGGCCAACCTTAGCAATCTGTGGCAC
TGGCCTAGATCTTACCTACCCCCCTGAACATCAAACACTAGCCAAAGAGATTTGGGGAAATGGTCTTTTATTAAGCGAAC
TGCCTTTGGGTGTCGGGCCCAGGGCCTTTCATTTCCCGCGTCGCAACCGCTTGATTGCTGCCTTGGCCTTGGGTGTTTTG
GTGGTAGAGGCTGCTCAGCGCTCGGGCTCCCTCATCACGGCACGCCTTGCGCTGGAATTGGGCAGGGAAGTTTTTGCCAT
CCCCTCGTCGATTCACAGCCCCTTGTCTGCTGGATGCCACCATTTAATTGGGCAAGGAGCAAAACTGGTCGCCTCTCCAA
AAGAAGTTCTGGAAGAGCTGATTTATTGA
ATGAGAAACAAACCGAGCTCCGCACAAATTCACCGTCTATCTTTGGGCGCCCCCAATTACCCTAAACGCTTGCTTGACTT
GGCAGACCCTCCTACTACTATTTATATAGCTGGAAAAGTTGAATTGCTGAGTTTGCCGATGGTGGCAATTGTCGGCTCTC
GAGCCCCCAGTCAAGAGGGGCTTAGAAATGCCCACTGCTTTGCTCAGGCTCTGGCAAGCTCGGGTCTTCTGGTAATTTCA
GGGCTAGCTAAAGGCATTGATGGAGTCTCACATCGAGCAGCACTTAGTTTGAGCCGGCCAACCTTAGCAATCTGTGGCAC
TGGCCTAGATCTTACCTACCCCCCTGAACATCAAACACTAGCCAAAGAGATTTGGGGAAATGGTCTTTTATTAAGCGAAC
TGCCTTTGGGTGTCGGGCCCAGGGCCTTTCATTTCCCGCGTCGCAACCGCTTGATTGCTGCCTTGGCCTTGGGTGTTTTG
GTGGTAGAGGCTGCTCAGCGCTCGGGCTCCCTCATCACGGCACGCCTTGCGCTGGAATTGGGCAGGGAAGTTTTTGCCAT
CCCCTCGTCGATTCACAGCCCCTTGTCTGCTGGATGCCACCATTTAATTGGGCAAGGAGCAAAACTGGTCGCCTCTCCAA
AAGAAGTTCTGGAAGAGCTGATTTATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.