Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | AOC19_RS09245 | Genome accession | NZ_CP061297 |
| Coordinates | 1827751..1828449 (+) | Length | 232 a.a. |
| NCBI ID | WP_215376362.1 | Uniprot ID | - |
| Organism | Polynucleobacter asymbioticus strain MWH-MoIso1 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1822751..1833449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOC19_RS09220 (AOC19_09220) | - | 1823385..1823966 (-) | 582 | WP_215376351.1 | DUF4390 domain-containing protein | - |
| AOC19_RS09225 (AOC19_09225) | rsmB | 1823963..1825276 (-) | 1314 | WP_251368028.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| AOC19_RS09230 (AOC19_09230) | htpX | 1825278..1826144 (-) | 867 | WP_215376353.1 | zinc metalloprotease HtpX | - |
| AOC19_RS09235 (AOC19_09235) | fmt | 1826137..1827156 (-) | 1020 | WP_215376356.1 | methionyl-tRNA formyltransferase | - |
| AOC19_RS09240 (AOC19_09240) | def | 1827164..1827679 (-) | 516 | WP_215376359.1 | peptide deformylase | - |
| AOC19_RS09245 (AOC19_09245) | dprA | 1827751..1828449 (+) | 699 | WP_215376362.1 | DNA-processing protein DprA | Machinery gene |
| AOC19_RS09250 (AOC19_09250) | - | 1828648..1831326 (+) | 2679 | WP_215376365.1 | DNA topoisomerase III | - |
| AOC19_RS09340 | mnmC | 1831386..1832387 (-) | 1002 | Protein_1808 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
Sequence
Protein
Download Length: 232 a.a. Molecular weight: 24721.64 Da Isoelectric Point: 8.7861
>NTDB_id=481675 AOC19_RS09245 WP_215376362.1 1827751..1828449(+) (dprA) [Polynucleobacter asymbioticus strain MWH-MoIso1]
MCILKNPNIVQIQRNSPGYPARLLDLYDPPNSLYIYGDIRLLNIPAIAIVGSRIASPEGVKNAHYFAQALSAEGYLIISG
LARGIDGAAHLGALGPNRDHPTIAVCGTGLDIVYPSEHLGLAQAIGSAGLLVSELASGSGPKAWHFPRRNRIIAALSLGI
LVVEAAERSGSLITARLGYELGREIFAIPGSIHNPLKRGCHQLLQQGAKLVQSPQDILEELPKCQKTSFKAI
MCILKNPNIVQIQRNSPGYPARLLDLYDPPNSLYIYGDIRLLNIPAIAIVGSRIASPEGVKNAHYFAQALSAEGYLIISG
LARGIDGAAHLGALGPNRDHPTIAVCGTGLDIVYPSEHLGLAQAIGSAGLLVSELASGSGPKAWHFPRRNRIIAALSLGI
LVVEAAERSGSLITARLGYELGREIFAIPGSIHNPLKRGCHQLLQQGAKLVQSPQDILEELPKCQKTSFKAI
Nucleotide
Download Length: 699 bp
>NTDB_id=481675 AOC19_RS09245 WP_215376362.1 1827751..1828449(+) (dprA) [Polynucleobacter asymbioticus strain MWH-MoIso1]
ATGTGCATACTCAAAAACCCAAACATCGTCCAAATTCAACGAAATTCCCCAGGCTACCCAGCTCGCCTGCTGGATTTATA
CGATCCACCCAACTCACTCTATATATATGGTGATATTCGCCTACTCAACATCCCGGCGATTGCTATCGTAGGCTCAAGAA
TTGCCAGCCCAGAGGGGGTCAAAAATGCTCACTATTTTGCGCAAGCCCTATCTGCCGAGGGTTACCTCATTATTTCCGGG
CTGGCTCGAGGCATTGATGGGGCAGCCCATTTGGGCGCCCTCGGGCCAAATCGGGACCACCCAACCATAGCAGTATGTGG
AACAGGGCTAGATATCGTGTACCCAAGTGAACACCTTGGATTGGCCCAGGCCATCGGTAGCGCAGGCCTCCTAGTGTCTG
AACTAGCCTCAGGATCGGGACCAAAAGCATGGCACTTCCCACGCAGGAACCGCATCATTGCCGCCCTCTCCCTAGGAATC
CTAGTGGTTGAGGCGGCTGAGCGCTCTGGTTCGCTTATTACAGCAAGGCTGGGCTATGAGCTTGGCCGAGAGATTTTTGC
TATTCCGGGGTCAATACATAACCCCCTTAAAAGGGGCTGTCACCAGCTACTGCAGCAAGGGGCCAAACTGGTCCAATCCC
CGCAAGACATCCTTGAGGAGTTACCAAAATGCCAAAAAACCTCATTTAAAGCTATTTAA
ATGTGCATACTCAAAAACCCAAACATCGTCCAAATTCAACGAAATTCCCCAGGCTACCCAGCTCGCCTGCTGGATTTATA
CGATCCACCCAACTCACTCTATATATATGGTGATATTCGCCTACTCAACATCCCGGCGATTGCTATCGTAGGCTCAAGAA
TTGCCAGCCCAGAGGGGGTCAAAAATGCTCACTATTTTGCGCAAGCCCTATCTGCCGAGGGTTACCTCATTATTTCCGGG
CTGGCTCGAGGCATTGATGGGGCAGCCCATTTGGGCGCCCTCGGGCCAAATCGGGACCACCCAACCATAGCAGTATGTGG
AACAGGGCTAGATATCGTGTACCCAAGTGAACACCTTGGATTGGCCCAGGCCATCGGTAGCGCAGGCCTCCTAGTGTCTG
AACTAGCCTCAGGATCGGGACCAAAAGCATGGCACTTCCCACGCAGGAACCGCATCATTGCCGCCCTCTCCCTAGGAATC
CTAGTGGTTGAGGCGGCTGAGCGCTCTGGTTCGCTTATTACAGCAAGGCTGGGCTATGAGCTTGGCCGAGAGATTTTTGC
TATTCCGGGGTCAATACATAACCCCCTTAAAAGGGGCTGTCACCAGCTACTGCAGCAAGGGGCCAAACTGGTCCAATCCC
CGCAAGACATCCTTGAGGAGTTACCAAAATGCCAAAAAACCTCATTTAAAGCTATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.