Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | ICU98_RS08845 | Genome accession | NZ_CP061296 |
| Coordinates | 1700243..1700911 (+) | Length | 222 a.a. |
| NCBI ID | WP_215352177.1 | Uniprot ID | - |
| Organism | Polynucleobacter sp. MWH-P3-07-1 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1695243..1705911
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ICU98_RS08825 (ICU98_08810) | - | 1696779..1697360 (-) | 582 | WP_215336600.1 | DUF4390 domain-containing protein | - |
| ICU98_RS08830 (ICU98_08815) | rsmB | 1697357..1698631 (-) | 1275 | WP_251365345.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| ICU98_RS08835 (ICU98_08820) | fmt | 1698657..1699646 (-) | 990 | WP_215352175.1 | methionyl-tRNA formyltransferase | - |
| ICU98_RS08840 (ICU98_08825) | def | 1699656..1700171 (-) | 516 | WP_215352176.1 | peptide deformylase | - |
| ICU98_RS08845 (ICU98_08830) | dprA | 1700243..1700911 (+) | 669 | WP_215352177.1 | DNA-processing protein DprA | Machinery gene |
| ICU98_RS08850 (ICU98_08835) | - | 1701130..1703793 (+) | 2664 | WP_215336610.1 | DNA topoisomerase III | - |
| ICU98_RS08935 | mnmC | 1703766..1704854 (-) | 1089 | Protein_1729 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
Sequence
Protein
Download Length: 222 a.a. Molecular weight: 23434.35 Da Isoelectric Point: 9.9698
>NTDB_id=481664 ICU98_RS08845 WP_215352177.1 1700243..1700911(+) (dprA) [Polynucleobacter sp. MWH-P3-07-1]
MRNKPSSAQIHRLSLGAPNYPKRLLDLADPPPTIYIAGKVELLSLPMVAIVGSRAPSQEGLRNAHSFAQALASSGLLVIS
GLAKGIDGVSHRAALSLSRPTLAICGTGLDLTYPPEHQALAKEIWGNGLLLSELPLGVGPRAFHFPRRNRLIAALALGVL
VVEAAQRSGSLITARLALELGREVFAIPSSIHSPLSAGCHYLIGQGAKLVSSPKEVLEELIY
MRNKPSSAQIHRLSLGAPNYPKRLLDLADPPPTIYIAGKVELLSLPMVAIVGSRAPSQEGLRNAHSFAQALASSGLLVIS
GLAKGIDGVSHRAALSLSRPTLAICGTGLDLTYPPEHQALAKEIWGNGLLLSELPLGVGPRAFHFPRRNRLIAALALGVL
VVEAAQRSGSLITARLALELGREVFAIPSSIHSPLSAGCHYLIGQGAKLVSSPKEVLEELIY
Nucleotide
Download Length: 669 bp
>NTDB_id=481664 ICU98_RS08845 WP_215352177.1 1700243..1700911(+) (dprA) [Polynucleobacter sp. MWH-P3-07-1]
ATGAGAAACAAACCGAGCTCCGCACAAATTCACCGTCTATCTTTGGGCGCCCCCAATTATCCTAAACGCTTGCTTGACTT
GGCAGACCCTCCTCCTACTATTTATATAGCTGGAAAAGTTGAATTGCTGAGTTTGCCGATGGTGGCAATTGTCGGCTCTC
GAGCCCCTAGTCAAGAGGGGCTTAGAAATGCCCACTCCTTTGCTCAGGCTCTGGCAAGCTCGGGTCTTCTGGTAATTTCA
GGGCTAGCTAAAGGCATTGATGGAGTCTCACATCGAGCAGCACTTAGTTTGAGCCGGCCAACCTTAGCAATCTGTGGCAC
TGGCCTAGATCTTACCTACCCCCCTGAACATCAAGCACTCGCCAAAGAGATTTGGGGAAATGGTCTTTTATTAAGCGAAC
TGCCTTTGGGTGTCGGGCCCAGGGCCTTTCATTTTCCGCGTCGCAACCGCTTGATTGCTGCCTTGGCCTTGGGTGTTTTG
GTGGTAGAGGCTGCTCAGCGCTCGGGCTCCCTCATCACGGCACGCCTTGCGCTGGAATTGGGCAGGGAAGTTTTTGCCAT
CCCCTCGTCGATTCATAGCCCTTTGTCTGCTGGGTGCCACTATTTAATCGGTCAAGGGGCAAAACTGGTAAGTTCGCCAA
AAGAAGTTCTGGAGGAGCTGATTTATTGA
ATGAGAAACAAACCGAGCTCCGCACAAATTCACCGTCTATCTTTGGGCGCCCCCAATTATCCTAAACGCTTGCTTGACTT
GGCAGACCCTCCTCCTACTATTTATATAGCTGGAAAAGTTGAATTGCTGAGTTTGCCGATGGTGGCAATTGTCGGCTCTC
GAGCCCCTAGTCAAGAGGGGCTTAGAAATGCCCACTCCTTTGCTCAGGCTCTGGCAAGCTCGGGTCTTCTGGTAATTTCA
GGGCTAGCTAAAGGCATTGATGGAGTCTCACATCGAGCAGCACTTAGTTTGAGCCGGCCAACCTTAGCAATCTGTGGCAC
TGGCCTAGATCTTACCTACCCCCCTGAACATCAAGCACTCGCCAAAGAGATTTGGGGAAATGGTCTTTTATTAAGCGAAC
TGCCTTTGGGTGTCGGGCCCAGGGCCTTTCATTTTCCGCGTCGCAACCGCTTGATTGCTGCCTTGGCCTTGGGTGTTTTG
GTGGTAGAGGCTGCTCAGCGCTCGGGCTCCCTCATCACGGCACGCCTTGCGCTGGAATTGGGCAGGGAAGTTTTTGCCAT
CCCCTCGTCGATTCATAGCCCTTTGTCTGCTGGGTGCCACTATTTAATCGGTCAAGGGGCAAAACTGGTAAGTTCGCCAA
AAGAAGTTCTGGAGGAGCTGATTTATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.