Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | C2755_RS10330 | Genome accession | NZ_CP061295 |
| Coordinates | 2040934..2041608 (+) | Length | 224 a.a. |
| NCBI ID | WP_215321237.1 | Uniprot ID | - |
| Organism | Polynucleobacter sp. MWH-S4W17 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2035934..2046608
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2755_RS10305 (C2755_10305) | - | 2036575..2037156 (-) | 582 | WP_251368481.1 | DUF4390 domain-containing protein | - |
| C2755_RS10310 (C2755_10310) | rsmB | 2037153..2038469 (-) | 1317 | WP_215321233.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| C2755_RS10315 (C2755_10315) | htpX | 2038471..2039337 (-) | 867 | WP_215321234.1 | zinc metalloprotease HtpX | - |
| C2755_RS10320 (C2755_10320) | fmt | 2039340..2040338 (-) | 999 | WP_215321235.1 | methionyl-tRNA formyltransferase | - |
| C2755_RS10325 (C2755_10325) | def | 2040347..2040862 (-) | 516 | WP_215321236.1 | peptide deformylase | - |
| C2755_RS10330 (C2755_10330) | dprA | 2040934..2041608 (+) | 675 | WP_215321237.1 | DNA-processing protein DprA | Machinery gene |
| C2755_RS10335 (C2755_10335) | - | 2041829..2044501 (+) | 2673 | WP_215321238.1 | DNA topoisomerase III | - |
| C2755_RS10410 | mnmC | 2044474..2045562 (-) | 1089 | Protein_2029 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
Sequence
Protein
Download Length: 224 a.a. Molecular weight: 23683.34 Da Isoelectric Point: 8.3730
>NTDB_id=481653 C2755_RS10330 WP_215321237.1 2040934..2041608(+) (dprA) [Polynucleobacter sp. MWH-S4W17]
MQTSPTPNSILQVNCQSPHYPNRLHDLYDPPGSLYIHGDIHLLKRPMIAIVGSRNASPEGLKNACLFAQALSKAGALIVS
GLAKGVDSAAHRSAIGLGPNHCTAAILGTGIDVVYPRQNIELSRAISQQGVLVSEFPLGSGPKAWHFPRRNRIIAALALG
VVVIEAAEKSGSLITARLAADLGREVFALPGPIHSANSAGCHLLIQQGAKLAFRPDDVLEELCF
MQTSPTPNSILQVNCQSPHYPNRLHDLYDPPGSLYIHGDIHLLKRPMIAIVGSRNASPEGLKNACLFAQALSKAGALIVS
GLAKGVDSAAHRSAIGLGPNHCTAAILGTGIDVVYPRQNIELSRAISQQGVLVSEFPLGSGPKAWHFPRRNRIIAALALG
VVVIEAAEKSGSLITARLAADLGREVFALPGPIHSANSAGCHLLIQQGAKLAFRPDDVLEELCF
Nucleotide
Download Length: 675 bp
>NTDB_id=481653 C2755_RS10330 WP_215321237.1 2040934..2041608(+) (dprA) [Polynucleobacter sp. MWH-S4W17]
ATGCAAACTTCGCCGACACCCAATTCCATTCTCCAAGTCAACTGCCAGAGCCCCCATTACCCAAATCGCCTCCATGATTT
ATATGATCCCCCAGGGTCTCTTTATATCCATGGGGACATTCACCTTCTGAAGAGACCTATGATTGCGATCGTAGGCTCAA
GAAACGCCAGCCCTGAAGGTTTAAAAAATGCATGCCTGTTTGCCCAAGCGCTATCGAAAGCGGGCGCCTTGATCGTTTCT
GGCCTAGCAAAAGGGGTTGACAGTGCTGCCCATAGGTCTGCCATTGGGCTTGGGCCCAATCACTGCACTGCGGCAATATT
AGGAACCGGCATAGATGTTGTCTACCCCCGGCAAAATATCGAACTATCTAGGGCCATCAGCCAGCAGGGCGTATTGGTGT
CTGAGTTCCCTCTGGGGTCAGGGCCTAAGGCATGGCACTTTCCTAGAAGAAATCGCATCATTGCCGCTTTAGCGCTTGGC
GTCGTTGTAATAGAGGCGGCTGAAAAGTCGGGCTCCCTTATCACTGCTCGCCTGGCCGCAGACCTTGGAAGAGAGGTTTT
TGCCCTTCCTGGGCCCATCCACAGCGCAAATTCTGCCGGCTGCCATCTACTTATTCAGCAAGGTGCAAAACTAGCCTTTA
GGCCAGATGATGTTCTTGAAGAGCTTTGTTTTTAA
ATGCAAACTTCGCCGACACCCAATTCCATTCTCCAAGTCAACTGCCAGAGCCCCCATTACCCAAATCGCCTCCATGATTT
ATATGATCCCCCAGGGTCTCTTTATATCCATGGGGACATTCACCTTCTGAAGAGACCTATGATTGCGATCGTAGGCTCAA
GAAACGCCAGCCCTGAAGGTTTAAAAAATGCATGCCTGTTTGCCCAAGCGCTATCGAAAGCGGGCGCCTTGATCGTTTCT
GGCCTAGCAAAAGGGGTTGACAGTGCTGCCCATAGGTCTGCCATTGGGCTTGGGCCCAATCACTGCACTGCGGCAATATT
AGGAACCGGCATAGATGTTGTCTACCCCCGGCAAAATATCGAACTATCTAGGGCCATCAGCCAGCAGGGCGTATTGGTGT
CTGAGTTCCCTCTGGGGTCAGGGCCTAAGGCATGGCACTTTCCTAGAAGAAATCGCATCATTGCCGCTTTAGCGCTTGGC
GTCGTTGTAATAGAGGCGGCTGAAAAGTCGGGCTCCCTTATCACTGCTCGCCTGGCCGCAGACCTTGGAAGAGAGGTTTT
TGCCCTTCCTGGGCCCATCCACAGCGCAAATTCTGCCGGCTGCCATCTACTTATTCAGCAAGGTGCAAAACTAGCCTTTA
GGCCAGATGATGTTCTTGAAGAGCTTTGTTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.