Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | C2756_RS11060 | Genome accession | NZ_CP061289 |
| Coordinates | 2116171..2116854 (+) | Length | 227 a.a. |
| NCBI ID | WP_215319413.1 | Uniprot ID | - |
| Organism | Polynucleobacter sp. UB-Siik-W21 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 2111171..2121854
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2756_RS11040 (C2756_11030) | - | 2112654..2113235 (-) | 582 | WP_215296054.1 | DUF4390 domain-containing protein | - |
| C2756_RS11045 (C2756_11035) | rsmB | 2113232..2114548 (-) | 1317 | WP_251372067.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| C2756_RS11050 (C2756_11040) | fmt | 2114565..2115569 (-) | 1005 | WP_215319411.1 | methionyl-tRNA formyltransferase | - |
| C2756_RS11055 (C2756_11045) | def | 2115579..2116094 (-) | 516 | WP_215321004.1 | peptide deformylase | - |
| C2756_RS11060 (C2756_11050) | dprA | 2116171..2116854 (+) | 684 | WP_215319413.1 | DNA-processing protein DprA | Machinery gene |
| C2756_RS11065 (C2756_11055) | - | 2117060..2119723 (+) | 2664 | WP_251372068.1 | DNA topoisomerase III | - |
| C2756_RS11155 | mnmC | 2119693..2120784 (-) | 1092 | Protein_2174 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
Sequence
Protein
Download Length: 227 a.a. Molecular weight: 23934.90 Da Isoelectric Point: 9.5940
>NTDB_id=481596 C2756_RS11060 WP_215319413.1 2116171..2116854(+) (dprA) [Polynucleobacter sp. UB-Siik-W21]
MSSIPRTIRKIVRGDQHYPARLNDLFDPPSCLYIKGNIGLLLMPMVAIVGSRNASAKGLKNASHFAQSLSKAGGAIISGL
AKGVDGAAHRATLGLGANHHTVGVCGTGLDIAYPPEHQGLMTTIGHHGLLVSEFPPGVGPKAFHFPRRNRIIAALSLGVV
VIEAAEKSGSLITARLACELGREVFALPGPIDDPLFGGCHQLIQQGAKLVRSPQDVLEELIFLKNPI
MSSIPRTIRKIVRGDQHYPARLNDLFDPPSCLYIKGNIGLLLMPMVAIVGSRNASAKGLKNASHFAQSLSKAGGAIISGL
AKGVDGAAHRATLGLGANHHTVGVCGTGLDIAYPPEHQGLMTTIGHHGLLVSEFPPGVGPKAFHFPRRNRIIAALSLGVV
VIEAAEKSGSLITARLACELGREVFALPGPIDDPLFGGCHQLIQQGAKLVRSPQDVLEELIFLKNPI
Nucleotide
Download Length: 684 bp
>NTDB_id=481596 C2756_RS11060 WP_215319413.1 2116171..2116854(+) (dprA) [Polynucleobacter sp. UB-Siik-W21]
ATGTCATCAATACCAAGAACCATCCGCAAAATTGTGCGCGGGGATCAACATTACCCAGCTCGGCTCAATGATCTTTTCGA
CCCTCCAAGTTGCCTATATATAAAAGGGAATATTGGGCTGCTGCTGATGCCCATGGTCGCCATTGTGGGCTCGCGCAACG
CCAGTGCCAAAGGACTCAAAAATGCCAGCCACTTTGCCCAAAGCCTGTCTAAGGCTGGTGGCGCCATTATTTCCGGGCTA
GCCAAGGGAGTTGACGGGGCAGCACACCGCGCCACACTTGGTCTTGGGGCAAACCATCACACGGTAGGCGTATGCGGGAC
TGGGCTAGACATTGCCTACCCTCCGGAGCACCAAGGACTGATGACGACGATTGGGCATCATGGTTTATTGGTTTCAGAGT
TTCCACCGGGGGTTGGTCCAAAAGCTTTTCACTTTCCCAGGCGCAATCGCATCATTGCAGCCCTGTCGCTAGGTGTAGTG
GTGATCGAAGCTGCTGAAAAATCAGGCTCCTTAATCACTGCCCGTCTTGCCTGTGAGCTGGGAAGGGAGGTTTTTGCTTT
ACCCGGCCCCATTGATGACCCTCTTTTTGGAGGCTGCCATCAACTCATACAACAGGGGGCCAAGTTGGTTCGAAGCCCCC
AAGATGTGCTGGAAGAGCTCATTTTTCTCAAAAACCCCATTTAA
ATGTCATCAATACCAAGAACCATCCGCAAAATTGTGCGCGGGGATCAACATTACCCAGCTCGGCTCAATGATCTTTTCGA
CCCTCCAAGTTGCCTATATATAAAAGGGAATATTGGGCTGCTGCTGATGCCCATGGTCGCCATTGTGGGCTCGCGCAACG
CCAGTGCCAAAGGACTCAAAAATGCCAGCCACTTTGCCCAAAGCCTGTCTAAGGCTGGTGGCGCCATTATTTCCGGGCTA
GCCAAGGGAGTTGACGGGGCAGCACACCGCGCCACACTTGGTCTTGGGGCAAACCATCACACGGTAGGCGTATGCGGGAC
TGGGCTAGACATTGCCTACCCTCCGGAGCACCAAGGACTGATGACGACGATTGGGCATCATGGTTTATTGGTTTCAGAGT
TTCCACCGGGGGTTGGTCCAAAAGCTTTTCACTTTCCCAGGCGCAATCGCATCATTGCAGCCCTGTCGCTAGGTGTAGTG
GTGATCGAAGCTGCTGAAAAATCAGGCTCCTTAATCACTGCCCGTCTTGCCTGTGAGCTGGGAAGGGAGGTTTTTGCTTT
ACCCGGCCCCATTGATGACCCTCTTTTTGGAGGCTGCCATCAACTCATACAACAGGGGGCCAAGTTGGTTCGAAGCCCCC
AAGATGTGCTGGAAGAGCTCATTTTTCTCAAAAACCCCATTTAA
3D structure
| Source | ID | Structure |
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Similar proteins
Only experimentally validated proteins are listed.