Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | HKK56_RS25735 | Genome accession | NZ_CP052858 |
| Coordinates | 5766961..5767995 (+) | Length | 344 a.a. |
| NCBI ID | WP_092231125.1 | Uniprot ID | A0AAW4ZYW2 |
| Organism | Pseudomonas sp. ADAK20 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5761961..5772995
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HKK56_RS25705 (HKK56_25705) | - | 5762379..5762813 (-) | 435 | WP_029300487.1 | DUF4426 domain-containing protein | - |
| HKK56_RS25710 (HKK56_25710) | metW | 5762835..5763455 (-) | 621 | WP_029300485.1 | methionine biosynthesis protein MetW | - |
| HKK56_RS25715 (HKK56_25715) | - | 5763463..5764602 (-) | 1140 | WP_029300483.1 | homoserine O-acetyltransferase | - |
| HKK56_RS25720 (HKK56_25720) | - | 5764765..5765355 (-) | 591 | WP_029300481.1 | YggT family protein | - |
| HKK56_RS25725 (HKK56_25725) | proC | 5765365..5766183 (-) | 819 | WP_169389984.1 | pyrroline-5-carboxylate reductase | - |
| HKK56_RS25730 (HKK56_25730) | - | 5766217..5766903 (-) | 687 | WP_029300479.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| HKK56_RS25735 (HKK56_25735) | pilT | 5766961..5767995 (+) | 1035 | WP_092231125.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| HKK56_RS25740 (HKK56_25740) | - | 5768136..5768771 (-) | 636 | WP_092231123.1 | C40 family peptidase | - |
| HKK56_RS25745 (HKK56_25745) | - | 5769021..5769449 (+) | 429 | WP_029300473.1 | TM2 domain-containing protein | - |
| HKK56_RS25750 (HKK56_25750) | - | 5769595..5770866 (-) | 1272 | WP_104911123.1 | dihydroorotase | - |
| HKK56_RS25755 (HKK56_25755) | - | 5770863..5771867 (-) | 1005 | WP_029300469.1 | aspartate carbamoyltransferase catalytic subunit | - |
| HKK56_RS25760 (HKK56_25760) | pyrR | 5771892..5772398 (-) | 507 | WP_029300467.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| HKK56_RS25765 (HKK56_25765) | ruvX | 5772481..5772918 (-) | 438 | WP_005792259.1 | Holliday junction resolvase RuvX | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 37368.94 Da Isoelectric Point: 7.0431
>NTDB_id=441824 HKK56_RS25735 WP_092231125.1 5766961..5767995(+) (pilT) [Pseudomonas sp. ADAK20]
MDITELLTASVSRGASDLHLSAGLAPRMRVDGEVVPLDWPPLSATQVADLLSPIMNKHQQKDFETSLETDFSFELPGVAR
FRANVFQQHRGMGAVFRAIPSRVQSLESLGLGDVFRRIAELPRGLVLVTGATGSGKSTTLAAMIDYLNNTRQQHILTLED
PIEFVHEPRTALISQRQVHRDTHSFSAALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRL
VDVFPAGEKAMVRSMLSESLQAVVSQVLLKKVGGGRVAAHEIMLGTPAIRNLIREDKVAQLYSAIQTGGALGMKTLDMSL
KGLVSQGLVSREEAQQKARVPTDM
MDITELLTASVSRGASDLHLSAGLAPRMRVDGEVVPLDWPPLSATQVADLLSPIMNKHQQKDFETSLETDFSFELPGVAR
FRANVFQQHRGMGAVFRAIPSRVQSLESLGLGDVFRRIAELPRGLVLVTGATGSGKSTTLAAMIDYLNNTRQQHILTLED
PIEFVHEPRTALISQRQVHRDTHSFSAALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRL
VDVFPAGEKAMVRSMLSESLQAVVSQVLLKKVGGGRVAAHEIMLGTPAIRNLIREDKVAQLYSAIQTGGALGMKTLDMSL
KGLVSQGLVSREEAQQKARVPTDM
Nucleotide
Download Length: 1035 bp
>NTDB_id=441824 HKK56_RS25735 WP_092231125.1 5766961..5767995(+) (pilT) [Pseudomonas sp. ADAK20]
ATGGACATCACTGAACTGCTGACCGCCAGCGTCAGCCGGGGCGCCTCCGACCTGCATCTGTCGGCAGGGTTGGCGCCGAG
GATGCGAGTCGATGGCGAGGTTGTGCCACTCGACTGGCCCCCATTGAGTGCTACGCAAGTAGCGGACTTACTCAGCCCGA
TCATGAATAAACACCAGCAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTTCCTTCGAGTTGCCCGGTGTGGCGCGC
TTTCGCGCCAATGTGTTCCAGCAGCACCGAGGGATGGGCGCGGTGTTTCGCGCGATTCCCTCCCGGGTGCAGAGCCTGGA
AAGCCTGGGGCTGGGCGACGTGTTCCGGCGCATCGCCGAACTGCCCAGGGGGTTGGTGCTGGTGACCGGGGCCACGGGCT
CGGGCAAGTCCACCACCCTGGCGGCGATGATCGATTACCTCAACAACACCCGTCAGCAACACATCCTGACCCTTGAAGAC
CCTATCGAATTTGTCCATGAACCGCGCACGGCGCTGATCAGCCAGCGCCAGGTGCATCGCGATACCCACAGTTTCTCCGC
CGCCCTGCGTTCTGCGCTGCGCGAAGACCCGGATGTGATCCTGGTCGGCGAGTTGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACGGCGGCTGAAACCGGGCACTTGGTGTTTGGCACCCTGCACACCAGTTCGGCGGCAAAGACCGTGGACCGGCTG
GTGGATGTGTTCCCCGCGGGGGAAAAGGCCATGGTCCGCTCGATGCTCTCGGAGTCGCTGCAGGCGGTGGTTTCCCAGGT
GTTGCTGAAAAAAGTCGGCGGCGGGCGCGTGGCGGCCCATGAAATCATGCTCGGTACACCGGCGATCCGTAACCTGATCC
GCGAGGACAAGGTGGCGCAGTTGTACTCGGCGATCCAGACGGGTGGGGCGTTGGGGATGAAGACGTTGGATATGAGCTTG
AAGGGGCTGGTGAGTCAGGGGCTGGTCAGCCGCGAAGAGGCGCAGCAGAAGGCGAGGGTGCCTACCGACATGTGA
ATGGACATCACTGAACTGCTGACCGCCAGCGTCAGCCGGGGCGCCTCCGACCTGCATCTGTCGGCAGGGTTGGCGCCGAG
GATGCGAGTCGATGGCGAGGTTGTGCCACTCGACTGGCCCCCATTGAGTGCTACGCAAGTAGCGGACTTACTCAGCCCGA
TCATGAATAAACACCAGCAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTTCCTTCGAGTTGCCCGGTGTGGCGCGC
TTTCGCGCCAATGTGTTCCAGCAGCACCGAGGGATGGGCGCGGTGTTTCGCGCGATTCCCTCCCGGGTGCAGAGCCTGGA
AAGCCTGGGGCTGGGCGACGTGTTCCGGCGCATCGCCGAACTGCCCAGGGGGTTGGTGCTGGTGACCGGGGCCACGGGCT
CGGGCAAGTCCACCACCCTGGCGGCGATGATCGATTACCTCAACAACACCCGTCAGCAACACATCCTGACCCTTGAAGAC
CCTATCGAATTTGTCCATGAACCGCGCACGGCGCTGATCAGCCAGCGCCAGGTGCATCGCGATACCCACAGTTTCTCCGC
CGCCCTGCGTTCTGCGCTGCGCGAAGACCCGGATGTGATCCTGGTCGGCGAGTTGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACGGCGGCTGAAACCGGGCACTTGGTGTTTGGCACCCTGCACACCAGTTCGGCGGCAAAGACCGTGGACCGGCTG
GTGGATGTGTTCCCCGCGGGGGAAAAGGCCATGGTCCGCTCGATGCTCTCGGAGTCGCTGCAGGCGGTGGTTTCCCAGGT
GTTGCTGAAAAAAGTCGGCGGCGGGCGCGTGGCGGCCCATGAAATCATGCTCGGTACACCGGCGATCCGTAACCTGATCC
GCGAGGACAAGGTGGCGCAGTTGTACTCGGCGATCCAGACGGGTGGGGCGTTGGGGATGAAGACGTTGGATATGAGCTTG
AAGGGGCTGGTGAGTCAGGGGCTGGTCAGCCGCGAAGAGGCGCAGCAGAAGGCGAGGGTGCCTACCGACATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.