Detailed information NTG0043187

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: SSUST1_RS00620
• Genome accession: NC_017950
• Coordinates: 97909..98379 (+)
• Length: 156 a.a.
• NCBI ID: WP_014735269.1
• Uniprot ID: -
• Organism: Streptococcus suis ST1
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 92909..103379

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUST1_RS00590 (SSUST1_0106)	rpsM	92954..93319 (+)	366	WP_014735265.1	30S ribosomal protein S13	-
SSUST1_RS00595 (SSUST1_0107)	rpsK	93337..93720 (+)	384	WP_014735266.1	30S ribosomal protein S11	-
SSUST1_RS00600 (SSUST1_0108)	-	93765..94703 (+)	939	WP_011921691.1	DNA-directed RNA polymerase subunit alpha	-
SSUST1_RS00605 (SSUST1_0109)	rplQ	94718..95104 (+)	387	WP_000331493.1	50S ribosomal protein L17	-
SSUST1_RS00610 (SSUST1_0110)	-	95237..96565 (-)	1329	WP_014735267.1	ISL3 family transposase	-
SSUST1_RS00615 (SSUST1_0111)	-	96836..97699 (+)	864	WP_014735268.1	IS982 family transposase	-
SSUST1_RS00620 (SSUST1_0112)	comX/sigX	97909..98379 (+)	471	WP_014735269.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 19043.97 Da
• Isoelectric Point: 9.2926

>NTDB_id=43187 SSUST1_RS00620 WP_014735269.1 97909..98379(+) (comX/sigX) [Streptococcus suis ST1]
MEFEKVYASVKGIVNKARKEFYIKLWDRDDWEQEGMMTLFELLEAQPWLVDEQVQLYCYFKVKFRNRIKDRIRKQESQKR
KFDRMPHEDIHELSHAIQSPGLINDELLMLRGALRDYQKNLSNDQLDKYEKLISGQCFNGRRKMIRDLQIHLKDFR

Nucleotide

• Length: 471 bp

>NTDB_id=43187 SSUST1_RS00620 WP_014735269.1 97909..98379(+) (comX/sigX) [Streptococcus suis ST1]
ATGGAATTCGAAAAAGTGTACGCAAGCGTCAAAGGTATTGTAAACAAGGCTCGAAAAGAGTTTTACATTAAACTATGGGA
TCGAGATGATTGGGAACAAGAAGGAATGATGACCTTGTTTGAATTATTGGAAGCTCAACCGTGGCTAGTTGATGAACAAG
TTCAATTATATTGTTATTTTAAAGTCAAGTTCAGAAATCGAATCAAGGATCGTATCCGCAAACAGGAAAGTCAAAAACGC
AAGTTTGACCGTATGCCACATGAAGATATTCACGAATTATCTCACGCAATACAATCACCGGGATTGATAAACGATGAACT
ATTAATGCTAAGAGGTGCCTTGAGAGATTATCAAAAAAATCTGAGTAATGATCAACTTGATAAATATGAAAAATTAATTA
GCGGACAATGTTTTAATGGTCGCCGTAAAATGATACGTGATTTACAAATTCATTTGAAAGACTTTCGCTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus suis D9	98.718	100	0.987
comX/sigX	Streptococcus suis isolate S10	98.077	100	0.981
comX/sigX	Streptococcus suis P1/7	98.077	100	0.981
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	48.387	99.359	0.481
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	48.387	99.359	0.481
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	45.098	98.077	0.442
comX/comX2	Streptococcus pneumoniae TIGR4	45.695	96.795	0.442
comX/comX1	Streptococcus pneumoniae TIGR4	45.695	96.795	0.442
comX/comX2	Streptococcus pneumoniae R6	45.033	96.795	0.436
comX/comX2	Streptococcus pneumoniae Rx1	45.033	96.795	0.436
comX/comX1	Streptococcus pneumoniae Rx1	45.033	96.795	0.436
comX/comX2	Streptococcus pneumoniae D39	45.033	96.795	0.436
comX/comX1	Streptococcus pneumoniae D39	45.033	96.795	0.436
comX/comX1	Streptococcus pneumoniae R6	45.033	96.795	0.436
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	44.444	98.077	0.436
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	44.444	98.077	0.436
comX/sigX	Streptococcus mutans UA159	43.226	99.359	0.429
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	43.791	98.077	0.429
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	40.645	99.359	0.404
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	40.645	99.359	0.404
comX	Streptococcus sobrinus strain NIDR 6715-7	40.523	98.077	0.397
comX	Streptococcus thermophilus LMG 18311	40.523	98.077	0.397
comX	Streptococcus thermophilus LMD-9	40.523	98.077	0.397
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	40	99.359	0.397
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	40	99.359	0.397
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	40	99.359	0.397
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	40	99.359	0.397
comX	Streptococcus salivarius SK126	39.869	98.077	0.391
comX/sigX	Streptococcus salivarius strain HSISS4	39.869	98.077	0.391
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	38.217	100	0.385