Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | C2750_RS08770 | Genome accession | NZ_CP049682 |
| Coordinates | 1697951..1698619 (+) | Length | 222 a.a. |
| NCBI ID | WP_215271970.1 | Uniprot ID | - |
| Organism | Polynucleobacter paneuropaeus strain AP-RePozz9-10-D2 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1692951..1703619
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2750_RS08750 (C2750_08750) | - | 1694487..1695068 (-) | 582 | WP_112208668.1 | DUF4390 domain-containing protein | - |
| C2750_RS08755 (C2750_08755) | rsmB | 1695065..1696423 (-) | 1359 | WP_244973672.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| C2750_RS08760 (C2750_08760) | fmt | 1696365..1697354 (-) | 990 | WP_112208670.1 | methionyl-tRNA formyltransferase | - |
| C2750_RS08765 (C2750_08765) | def | 1697364..1697879 (-) | 516 | WP_112295124.1 | peptide deformylase | - |
| C2750_RS08770 (C2750_08770) | dprA | 1697951..1698619 (+) | 669 | WP_215271970.1 | DNA-processing protein DprA | Machinery gene |
| C2750_RS08775 (C2750_08775) | - | 1698837..1701500 (+) | 2664 | WP_112318547.1 | DNA topoisomerase III | - |
| C2750_RS08870 (C2750_08780) | mnmC | 1701560..1702561 (-) | 1002 | Protein_1713 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
Sequence
Protein
Download Length: 222 a.a. Molecular weight: 23300.25 Da Isoelectric Point: 7.9593
>NTDB_id=426535 C2750_RS08770 WP_215271970.1 1697951..1698619(+) (dprA) [Polynucleobacter paneuropaeus strain AP-RePozz9-10-D2]
MKNELPANSILPLALGATNYPKRLLDLADPPRTIYIAGKIELLSVPMIAIVGSRVASPEGIKNAGYFARTLASEGLLVIS
GLARGIDGASHRAALAVGQPTLAICGTGLDLTYPPEHHELANEIQKNGLLLGELPLGIGPKAFHFPRRNRLIAALAIGVL
VVEAAQQSGSLITARLALELGREVFAIPSSIHSPLSAGCHHLIGQGAKLVASPKEVLEELIY
MKNELPANSILPLALGATNYPKRLLDLADPPRTIYIAGKIELLSVPMIAIVGSRVASPEGIKNAGYFARTLASEGLLVIS
GLARGIDGASHRAALAVGQPTLAICGTGLDLTYPPEHHELANEIQKNGLLLGELPLGIGPKAFHFPRRNRLIAALAIGVL
VVEAAQQSGSLITARLALELGREVFAIPSSIHSPLSAGCHHLIGQGAKLVASPKEVLEELIY
Nucleotide
Download Length: 669 bp
>NTDB_id=426535 C2750_RS08770 WP_215271970.1 1697951..1698619(+) (dprA) [Polynucleobacter paneuropaeus strain AP-RePozz9-10-D2]
ATGAAAAATGAACTGCCAGCCAACTCTATTTTGCCCCTAGCTTTAGGTGCTACAAACTATCCCAAACGCCTTCTTGACTT
GGCCGATCCTCCGCGCACTATTTATATAGCAGGAAAAATAGAGTTGCTGAGTGTGCCCATGATCGCTATTGTTGGCTCTC
GGGTAGCTAGCCCAGAAGGAATCAAAAATGCCGGTTACTTTGCTAGAACCCTTGCCAGCGAGGGCCTACTAGTCATTTCT
GGCTTGGCCAGGGGCATTGATGGGGCTTCGCACCGGGCAGCCCTTGCGGTGGGCCAACCCACATTAGCAATCTGCGGCAC
CGGCCTAGATCTCACCTACCCACCTGAACATCATGAGTTAGCGAATGAAATTCAGAAAAATGGTCTTTTATTGGGCGAGC
TGCCCTTAGGCATAGGACCCAAGGCCTTTCACTTCCCGCGTCGCAACCGCCTGATTGCAGCCCTGGCCATAGGGGTTTTA
GTGGTAGAAGCCGCCCAGCAATCGGGCTCACTTATTACGGCCCGCCTTGCATTGGAATTGGGCAGAGAAGTTTTTGCCAT
ACCCTCCTCGATTCACAGCCCCTTGTCTGCTGGATGCCACCATTTAATTGGGCAAGGGGCAAAACTGGTCGCCTCTCCAA
AAGAAGTTCTGGAAGAGCTGATTTATTGA
ATGAAAAATGAACTGCCAGCCAACTCTATTTTGCCCCTAGCTTTAGGTGCTACAAACTATCCCAAACGCCTTCTTGACTT
GGCCGATCCTCCGCGCACTATTTATATAGCAGGAAAAATAGAGTTGCTGAGTGTGCCCATGATCGCTATTGTTGGCTCTC
GGGTAGCTAGCCCAGAAGGAATCAAAAATGCCGGTTACTTTGCTAGAACCCTTGCCAGCGAGGGCCTACTAGTCATTTCT
GGCTTGGCCAGGGGCATTGATGGGGCTTCGCACCGGGCAGCCCTTGCGGTGGGCCAACCCACATTAGCAATCTGCGGCAC
CGGCCTAGATCTCACCTACCCACCTGAACATCATGAGTTAGCGAATGAAATTCAGAAAAATGGTCTTTTATTGGGCGAGC
TGCCCTTAGGCATAGGACCCAAGGCCTTTCACTTCCCGCGTCGCAACCGCCTGATTGCAGCCCTGGCCATAGGGGTTTTA
GTGGTAGAAGCCGCCCAGCAATCGGGCTCACTTATTACGGCCCGCCTTGCATTGGAATTGGGCAGAGAAGTTTTTGCCAT
ACCCTCCTCGATTCACAGCCCCTTGTCTGCTGGATGCCACCATTTAATTGGGCAAGGGGCAAAACTGGTCGCCTCTCCAA
AAGAAGTTCTGGAAGAGCTGATTTATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.