Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | C2753_RS08290 | Genome accession | NZ_CP049680 |
| Coordinates | 1629873..1630541 (+) | Length | 222 a.a. |
| NCBI ID | WP_215271970.1 | Uniprot ID | - |
| Organism | Polynucleobacter paneuropaeus strain AP-RePozz9-5-G2 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1624873..1635541
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2753_RS08270 (C2753_08270) | - | 1626409..1626990 (-) | 582 | WP_112208668.1 | DUF4390 domain-containing protein | - |
| C2753_RS08275 (C2753_08275) | rsmB | 1626987..1628345 (-) | 1359 | WP_244973672.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| C2753_RS08280 (C2753_08280) | fmt | 1628287..1629276 (-) | 990 | WP_112208670.1 | methionyl-tRNA formyltransferase | - |
| C2753_RS08285 (C2753_08285) | def | 1629286..1629801 (-) | 516 | WP_112295124.1 | peptide deformylase | - |
| C2753_RS08290 (C2753_08290) | dprA | 1629873..1630541 (+) | 669 | WP_215271970.1 | DNA-processing protein DprA | Machinery gene |
| C2753_RS08295 (C2753_08295) | - | 1630759..1633422 (+) | 2664 | WP_112318547.1 | DNA topoisomerase III | - |
| C2753_RS08385 (C2753_08300) | mnmC | 1633482..1634483 (-) | 1002 | Protein_1618 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
Sequence
Protein
Download Length: 222 a.a. Molecular weight: 23300.25 Da Isoelectric Point: 7.9593
>NTDB_id=426512 C2753_RS08290 WP_215271970.1 1629873..1630541(+) (dprA) [Polynucleobacter paneuropaeus strain AP-RePozz9-5-G2]
MKNELPANSILPLALGATNYPKRLLDLADPPRTIYIAGKIELLSVPMIAIVGSRVASPEGIKNAGYFARTLASEGLLVIS
GLARGIDGASHRAALAVGQPTLAICGTGLDLTYPPEHHELANEIQKNGLLLGELPLGIGPKAFHFPRRNRLIAALAIGVL
VVEAAQQSGSLITARLALELGREVFAIPSSIHSPLSAGCHHLIGQGAKLVASPKEVLEELIY
MKNELPANSILPLALGATNYPKRLLDLADPPRTIYIAGKIELLSVPMIAIVGSRVASPEGIKNAGYFARTLASEGLLVIS
GLARGIDGASHRAALAVGQPTLAICGTGLDLTYPPEHHELANEIQKNGLLLGELPLGIGPKAFHFPRRNRLIAALAIGVL
VVEAAQQSGSLITARLALELGREVFAIPSSIHSPLSAGCHHLIGQGAKLVASPKEVLEELIY
Nucleotide
Download Length: 669 bp
>NTDB_id=426512 C2753_RS08290 WP_215271970.1 1629873..1630541(+) (dprA) [Polynucleobacter paneuropaeus strain AP-RePozz9-5-G2]
ATGAAAAATGAACTGCCAGCCAACTCTATTTTGCCCCTAGCTTTAGGTGCTACAAACTATCCCAAACGCCTTCTTGACTT
GGCCGATCCTCCGCGCACTATTTATATAGCAGGAAAAATAGAGTTGCTGAGTGTGCCCATGATCGCTATTGTTGGCTCTC
GGGTAGCTAGCCCAGAAGGAATCAAAAATGCCGGTTACTTTGCTAGAACCCTTGCCAGCGAGGGCCTACTAGTCATTTCT
GGCTTGGCCAGGGGCATTGATGGGGCTTCGCACCGGGCAGCCCTTGCGGTGGGCCAACCCACATTAGCAATCTGCGGCAC
CGGCCTAGATCTCACCTACCCACCTGAACATCATGAGTTAGCGAATGAAATTCAGAAAAATGGTCTTTTATTGGGCGAGC
TGCCCTTAGGCATAGGACCCAAGGCCTTTCACTTCCCGCGTCGCAACCGCCTGATTGCAGCCCTGGCCATAGGGGTTTTA
GTGGTAGAAGCCGCCCAGCAATCGGGCTCACTTATTACGGCCCGCCTTGCATTGGAATTGGGCAGAGAAGTTTTTGCCAT
ACCCTCCTCGATTCACAGCCCCTTGTCTGCTGGATGCCACCATTTAATTGGGCAAGGGGCAAAACTGGTCGCCTCTCCAA
AAGAAGTTCTGGAAGAGCTGATTTATTGA
ATGAAAAATGAACTGCCAGCCAACTCTATTTTGCCCCTAGCTTTAGGTGCTACAAACTATCCCAAACGCCTTCTTGACTT
GGCCGATCCTCCGCGCACTATTTATATAGCAGGAAAAATAGAGTTGCTGAGTGTGCCCATGATCGCTATTGTTGGCTCTC
GGGTAGCTAGCCCAGAAGGAATCAAAAATGCCGGTTACTTTGCTAGAACCCTTGCCAGCGAGGGCCTACTAGTCATTTCT
GGCTTGGCCAGGGGCATTGATGGGGCTTCGCACCGGGCAGCCCTTGCGGTGGGCCAACCCACATTAGCAATCTGCGGCAC
CGGCCTAGATCTCACCTACCCACCTGAACATCATGAGTTAGCGAATGAAATTCAGAAAAATGGTCTTTTATTGGGCGAGC
TGCCCTTAGGCATAGGACCCAAGGCCTTTCACTTCCCGCGTCGCAACCGCCTGATTGCAGCCCTGGCCATAGGGGTTTTA
GTGGTAGAAGCCGCCCAGCAATCGGGCTCACTTATTACGGCCCGCCTTGCATTGGAATTGGGCAGAGAAGTTTTTGCCAT
ACCCTCCTCGATTCACAGCCCCTTGTCTGCTGGATGCCACCATTTAATTGGGCAAGGGGCAAAACTGGTCGCCTCTCCAA
AAGAAGTTCTGGAAGAGCTGATTTATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.