Detailed information NTG0419452

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: GVU25_RS11610
• Genome accession: NZ_CP048014
• Coordinates: 2407332..2407766 (+)
• Length: 144 a.a.
• NCBI ID: WP_167846368.1
• Uniprot ID: -
• Organism: Acinetobacter towneri strain 205
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	2406736..2418396	2407332..2407766	within	0

Gene organization within MGE regions

Location: 2406736..2418396

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GVU25_RS11605 (GVU25_11560)	-	2406736..2406948 (+)	213	WP_225530214.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
GVU25_RS11610 (GVU25_11565)	pilE	2407332..2407766 (+)	435	WP_167846368.1	pilin	Machinery gene
GVU25_RS11615 (GVU25_11570)	-	2407800..2409752 (+)	1953	WP_225530213.1	tetratricopeptide repeat protein	-
GVU25_RS11620 (GVU25_11575)	-	2409763..2410614 (+)	852	WP_167846369.1	glycosyltransferase family 2 protein	-
GVU25_RS11625 (GVU25_11580)	-	2410620..2412335 (+)	1716	WP_167846370.1	ABC transporter ATP-binding protein	-
GVU25_RS11630 (GVU25_11585)	-	2412332..2414065 (+)	1734	WP_167846371.1	glycosyltransferase	-
GVU25_RS11635 (GVU25_11590)	-	2414055..2414975 (+)	921	WP_167846372.1	glycosyltransferase family 2 protein	-
GVU25_RS11640 (GVU25_11595)	glf	2414985..2416079 (+)	1095	WP_167846373.1	UDP-galactopyranose mutase	-
GVU25_RS11645 (GVU25_11600)	-	2416113..2417189 (+)	1077	WP_225530212.1	glycosyltransferase family 4 protein	-
GVU25_RS11650 (GVU25_11605)	-	2417170..2418396 (-)	1227	WP_167846375.1	glycosyltransferase family 4 protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 14709.84 Da
• Isoelectric Point: 7.8176

>NTDB_id=419452 GVU25_RS11610 WP_167846368.1 2407332..2407766(+) (pilE) [Acinetobacter towneri strain 205]
MNTMQKGFTLIELMIVVAIIGILAAIAIPAYQSYTKRAHVSEGLSLAGGAKAAVTEYVSSTNTWPAANSDAGLAAANTIK
GSAVDSVNAAGGKIVITYNEKVAASGQTVTLELSPLTTSGGVTWKCQPGSTNPIDPTLIPTNCR

Nucleotide

• Length: 435 bp

>NTDB_id=419452 GVU25_RS11610 WP_167846368.1 2407332..2407766(+) (pilE) [Acinetobacter towneri strain 205]
ATGAATACAATGCAGAAGGGCTTCACGCTCATCGAGCTTATGATTGTTGTTGCTATTATCGGTATTCTTGCCGCAATTGC
AATTCCTGCTTATCAAAGCTACACGAAGCGTGCCCACGTTTCTGAAGGCCTAAGTCTAGCTGGTGGTGCAAAAGCTGCCG
TTACGGAATATGTTTCATCGACAAATACTTGGCCAGCAGCTAACTCTGATGCTGGATTAGCAGCAGCAAACACAATTAAA
GGATCCGCAGTGGACTCTGTAAATGCAGCGGGTGGAAAAATTGTGATTACTTACAATGAAAAAGTTGCTGCATCAGGTCA
GACTGTAACTTTAGAACTCAGCCCTCTAACTACTTCTGGCGGTGTGACTTGGAAATGTCAACCCGGTTCAACCAATCCGA
TTGACCCTACTTTAATTCCGACTAACTGTCGTTAA

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (37-144)

• Prokaryotic N-terminal methylation motif (N_methyl) (4-27)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Neisseria gonorrhoeae strain FA1090	47.531	100	0.535
pilE	Neisseria gonorrhoeae MS11	44.654	100	0.493
pilA2	Legionella pneumophila strain ERS1305867	48.951	99.306	0.486
pilA	Ralstonia pseudosolanacearum GMI1000	40.964	100	0.472
comP	Acinetobacter baylyi ADP1	44.667	100	0.465
pilA2	Legionella pneumophila str. Paris	47.857	97.222	0.465
pilA	Haemophilus influenzae 86-028NP	43.056	100	0.431
pilA	Haemophilus influenzae Rd KW20	42.177	100	0.431
pilA/pilA1	Eikenella corrodens VA1	40	100	0.431
pilA	Vibrio campbellii strain DS40M4	38.462	100	0.417
pilA	Pseudomonas aeruginosa PAK	38.255	100	0.396
pilA	Acinetobacter baumannii strain A118	43.511	90.972	0.396
pilA/pilAI	Pseudomonas stutzeri DSM 10701	38.462	99.306	0.382
pilA	Vibrio cholerae C6706	36.986	100	0.375
pilA	Vibrio cholerae strain A1552	36.986	100	0.375
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	36.986	100	0.375
pilA	Vibrio parahaemolyticus RIMD 2210633	41.538	90.278	0.375
pilA/pilAII	Pseudomonas stutzeri DSM 10701	37.589	97.917	0.368