Detailed information NTG0040824

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: SSUD12_RS00080
• Genome accession: NC_017621
• Coordinates: 16033..16503 (+)
• Length: 156 a.a.
• NCBI ID: WP_014637247.1
• Uniprot ID: -
• Organism: Streptococcus suis D12
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 11033..21503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUD12_RS00065 (SSUD12_0013)	tilS	11848..13116 (+)	1269	WP_014637245.1	tRNA lysidine(34) synthetase TilS	-
SSUD12_RS00070 (SSUD12_0014)	hpt	13124..13666 (+)	543	WP_014637246.1	hypoxanthine phosphoribosyltransferase	-
SSUD12_RS12040	-	13688..14017 (+)	330	Protein_14	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	-
SSUD12_RS12045	-	14231..14566 (+)	336	Protein_15	AAA family ATPase	-
SSUD12_RS11770	-	14511..15695 (+)	1185	WP_268741106.1	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	-
SSUD12_RS00080 (SSUD12_0017)	comX/sigX	16033..16503 (+)	471	WP_014637247.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 19024.89 Da
• Isoelectric Point: 8.4641

>NTDB_id=40824 SSUD12_RS00080 WP_014637247.1 16033..16503(+) (comX/sigX) [Streptococcus suis D12]
MEFEKVYASVKGIVNKARKEFYIKLWDRDDWEQEGMMTLFELLEAQPWLVDEQVQLYCYFKVKFRNRIKDRIRKQESQKR
KFDRMPHEDIHELSHAIQSPGLINDELLMLRGALRDDRKNLSNDQLDKYEKLISGQCFNGRREMIRDLQIHLKDFR

Nucleotide

• Length: 471 bp

>NTDB_id=40824 SSUD12_RS00080 WP_014637247.1 16033..16503(+) (comX/sigX) [Streptococcus suis D12]
ATGGAATTCGAAAAAGTGTACGCAAGCGTCAAAGGTATTGTAAACAAGGCTCGAAAAGAGTTTTACATTAAACTATGGGA
TCGAGATGATTGGGAACAAGAAGGAATGATGACCTTGTTTGAATTGTTGGAAGCTCAACCGTGGCTAGTTGATGAACAAG
TTCAATTATATTGTTATTTTAAAGTTAAGTTCAGAAATCGAATCAAAGATCGTATCCGCAAACAGGAAAGTCAAAAACGC
AAGTTTGACCGTATGCCACATGAAGATATTCACGAATTATCTCACGCAATACAATCACCGGGATTAATAAACGATGAACT
ATTAATGCTAAGAGGTGCCTTGAGAGATGATCGAAAAAATCTGAGCAATGATCAACTTGATAAATACGAAAAATTAATTA
GCGGACAATGTTTTAATGGTCGCCGTGAAATGATACGTGATTTACAAATTCATTTGAAAGACTTTCGCTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus suis D9	99.359	100	0.994
comX/sigX	Streptococcus suis isolate S10	98.718	100	0.987
comX/sigX	Streptococcus suis P1/7	98.718	100	0.987
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	48.387	99.359	0.481
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	48.387	99.359	0.481
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	45.098	98.077	0.442
comX/comX1	Streptococcus pneumoniae TIGR4	45.695	96.795	0.442
comX/comX2	Streptococcus pneumoniae TIGR4	45.695	96.795	0.442
comX/comX1	Streptococcus pneumoniae R6	45.033	96.795	0.436
comX/comX2	Streptococcus pneumoniae Rx1	45.033	96.795	0.436
comX/comX1	Streptococcus pneumoniae Rx1	45.033	96.795	0.436
comX/comX2	Streptococcus pneumoniae D39	45.033	96.795	0.436
comX/comX1	Streptococcus pneumoniae D39	45.033	96.795	0.436
comX/comX2	Streptococcus pneumoniae R6	45.033	96.795	0.436
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	44.444	98.077	0.436
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	44.444	98.077	0.436
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	43.791	98.077	0.429
comX/sigX	Streptococcus mutans UA159	42.581	99.359	0.423
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	40.645	99.359	0.404
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	40.645	99.359	0.404
comX	Streptococcus sobrinus strain NIDR 6715-7	40.523	98.077	0.397
comX	Streptococcus thermophilus LMG 18311	40.523	98.077	0.397
comX	Streptococcus thermophilus LMD-9	40.523	98.077	0.397
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	40	99.359	0.397
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	40	99.359	0.397
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	40	99.359	0.397
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	40	99.359	0.397
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	38.854	100	0.391
comX	Streptococcus salivarius SK126	39.869	98.077	0.391
comX/sigX	Streptococcus salivarius strain HSISS4	39.869	98.077	0.391