Detailed information NTG0404970

Bioinformatically predicted

Overview

• Name: comX/comX2
• Type: Regulator
• Locus tag: GOM47_RS01070
• Genome accession: NZ_CP046524
• Coordinates: 198045..198518 (+)
• Length: 157 a.a.
• NCBI ID: WP_235080682.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain SOT
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 193045..203518

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOM47_RS01045 (GOM47_01045)	-	193788..194663 (-)	876	WP_235080798.1	RluA family pseudouridine synthase	-
GOM47_RS01050 (GOM47_01050)	pbp2a	194750..196945 (+)	2196	WP_235080799.1	penicillin-binding protein PBP2A	-
GOM47_RS01055 (GOM47_01055)	rpmG	196998..197150 (+)	153	WP_001809375.1	50S ribosomal protein L33	-
GOM47_RS01060 (GOM47_01060)	secE	197160..197336 (+)	177	WP_000505776.1	preprotein translocase subunit SecE	-
GOM47_RS01065 (GOM47_01065)	nusG	197389..197925 (+)	537	WP_000376729.1	transcription termination/antitermination protein NusG	-
GOM47_RS01070 (GOM47_01070)	comX/comX2	198045..198518 (+)	474	WP_235080682.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 19308.24 Da
• Isoelectric Point: 8.2723

>NTDB_id=404970 GOM47_RS01070 WP_235080682.1 198045..198518(+) (comX/comX2) [Streptococcus oralis strain SOT]
MNLKELYEESKGIVHKCRKEYHLHLWEKEDWDQEGMLCLYELVSHHPELLVGERHRLYVCFKTKFRNRILDYIRKQESHK
RRFDKEPYEEVSEISHRLGEKGLRLDDYYLFHELLKTYKSKQSMEKQELVDRLMGGEVFRGRKALLRELSLIFSEFR

Nucleotide

• Length: 474 bp

>NTDB_id=404970 GOM47_RS01070 WP_235080682.1 198045..198518(+) (comX/comX2) [Streptococcus oralis strain SOT]
ATGAATCTAAAAGAATTATACGAAGAAAGCAAAGGAATCGTTCATAAGTGCCGCAAAGAATACCATTTACATCTGTGGGA
GAAAGAGGACTGGGACCAGGAGGGGATGCTGTGCCTGTATGAACTGGTCAGTCACCATCCAGAATTGCTAGTGGGTGAAC
GACACCGACTATATGTCTGCTTTAAAACCAAATTCCGCAATCGTATCCTAGATTACATCCGTAAACAGGAAAGTCACAAG
CGCCGTTTCGACAAAGAACCCTATGAAGAGGTGAGTGAGATTAGCCATCGTCTAGGAGAAAAAGGACTCAGACTGGATGA
TTATTATCTCTTTCACGAACTTCTAAAGACTTACAAATCAAAGCAGAGTATGGAAAAACAAGAGTTAGTGGACCGTCTCA
TGGGAGGGGAAGTCTTCAGAGGACGTAAAGCTCTTCTAAGAGAACTTTCCCTTATCTTTTCAGAATTTCGATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/comX2	Streptococcus pneumoniae Rx1	66.883	98.089	0.656
comX/comX2	Streptococcus pneumoniae D39	66.883	98.089	0.656
comX/comX1	Streptococcus pneumoniae D39	66.883	98.089	0.656
comX/comX2	Streptococcus pneumoniae R6	66.883	98.089	0.656
comX/comX1	Streptococcus pneumoniae R6	66.883	98.089	0.656
comX/comX1	Streptococcus pneumoniae Rx1	66.883	98.089	0.656
comX/comX2	Streptococcus pneumoniae TIGR4	66.234	98.089	0.65
comX/comX1	Streptococcus pneumoniae TIGR4	66.234	98.089	0.65
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	65.584	98.089	0.643
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	64.935	98.089	0.637
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	64.286	98.089	0.631
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	64.286	98.089	0.631
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	52.564	99.363	0.522
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	52.564	99.363	0.522
comX/sigX	Streptococcus mutans UA159	46.711	96.815	0.452
comX/sigX	Streptococcus suis isolate S10	42.038	100	0.42
comX/sigX	Streptococcus suis D9	42.038	100	0.42
comX/sigX	Streptococcus suis P1/7	42.038	100	0.42
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	39.103	99.363	0.389
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	39.103	99.363	0.389
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	39.103	99.363	0.389
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	39.103	99.363	0.389
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	39.103	99.363	0.389
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	39.103	99.363	0.389
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	37.975	100	0.382
comX/sigX	Streptococcus salivarius strain HSISS4	40	95.541	0.382
comX	Streptococcus salivarius SK126	40	95.541	0.382
comX	Streptococcus thermophilus LMG 18311	39.333	95.541	0.376
comX	Streptococcus thermophilus LMD-9	39.333	95.541	0.376
comX	Streptococcus sobrinus strain NIDR 6715-7	39.86	91.083	0.363