Detailed information NTG0404896

Bioinformatically predicted

Overview

• Name: comX/comX2
• Type: Regulator
• Locus tag: GOM48_RS01050
• Genome accession: NZ_CP046523
• Coordinates: 203806..204279 (+)
• Length: 157 a.a.
• NCBI ID: WP_235097825.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain SOD
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 198806..209279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOM48_RS01025 (GOM48_01010)	-	199548..200423 (-)	876	WP_223329166.1	RluA family pseudouridine synthase	-
GOM48_RS01030 (GOM48_01015)	pbp2a	200510..202705 (+)	2196	WP_235097823.1	penicillin-binding protein PBP2A	-
GOM48_RS01035 (GOM48_01020)	rpmG	202758..202910 (+)	153	WP_001809375.1	50S ribosomal protein L33	-
GOM48_RS01040 (GOM48_01025)	secE	202920..203096 (+)	177	WP_000505776.1	preprotein translocase subunit SecE	-
GOM48_RS01045 (GOM48_01030)	nusG	203149..203685 (+)	537	WP_000376732.1	transcription termination/antitermination protein NusG	-
GOM48_RS01050 (GOM48_01035)	comX/comX2	203806..204279 (+)	474	WP_235097825.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 19232.07 Da
• Isoelectric Point: 8.1382

>NTDB_id=404896 GOM48_RS01050 WP_235097825.1 203806..204279(+) (comX/comX2) [Streptococcus oralis strain SOD]
MNLKELYEESKGIVNKCRKEYHLHLWEKEDWEQEGMMCLYELVSHHPELLEGERRRLYVCFKTKFRNRILDYIRKQESHK
RRFDKEPYEEVSEISHRLGEKSLRLDDYYLFHELLKNYKASQGKEKQEQLERLMGGECFKGRKALLGELRVVLSDFR

Nucleotide

• Length: 474 bp

>NTDB_id=404896 GOM48_RS01050 WP_235097825.1 203806..204279(+) (comX/comX2) [Streptococcus oralis strain SOD]
ATGAATCTGAAAGAGTTGTATGAAGAAAGTAAAGGGATTGTAAACAAGTGCCGCAAAGAATACCATTTACATCTGTGGGA
GAAAGAGGACTGGGAGCAGGAGGGAATGATGTGCCTGTATGAGCTGGTCAGTCACCATCCAGAGTTACTAGAGGGTGAGC
GTCGCCGATTATATGTGTGCTTTAAAACCAAATTCCGCAATCGCATCCTAGACTACATCCGTAAACAGGAAAGTCACAAG
CGCCGTTTCGATAAAGAACCTTATGAGGAGGTGAGCGAAATCAGCCATCGCCTAGGAGAAAAAAGCCTGAGACTGGATGA
TTATTATCTCTTTCATGAGCTTCTAAAGAATTACAAGGCAAGTCAGGGGAAAGAAAAACAAGAACAACTAGAACGTCTGA
TGGGAGGAGAATGTTTCAAAGGACGTAAGGCACTTCTAGGAGAATTAAGAGTGGTATTGAGTGATTTTAGATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/comX2	Streptococcus pneumoniae TIGR4	63.636	98.089	0.624
comX/comX1	Streptococcus pneumoniae TIGR4	63.636	98.089	0.624
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	62.987	98.089	0.618
comX/comX1	Streptococcus pneumoniae Rx1	62.987	98.089	0.618
comX/comX2	Streptococcus pneumoniae D39	62.987	98.089	0.618
comX/comX1	Streptococcus pneumoniae D39	62.987	98.089	0.618
comX/comX2	Streptococcus pneumoniae R6	62.987	98.089	0.618
comX/comX1	Streptococcus pneumoniae R6	62.987	98.089	0.618
comX/comX2	Streptococcus pneumoniae Rx1	62.987	98.089	0.618
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	62.338	98.089	0.611
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	62.338	98.089	0.611
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	62.338	98.089	0.611
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	53.846	99.363	0.535
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	53.846	99.363	0.535
comX/sigX	Streptococcus mutans UA159	47.368	96.815	0.459
comX/sigX	Streptococcus suis isolate S10	43.949	100	0.439
comX/sigX	Streptococcus suis D9	43.949	100	0.439
comX/sigX	Streptococcus suis P1/7	43.949	100	0.439
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	39.241	100	0.395
comX	Streptococcus thermophilus LMG 18311	41.333	95.541	0.395
comX	Streptococcus thermophilus LMD-9	41.333	95.541	0.395
comX/sigX	Streptococcus salivarius strain HSISS4	40.667	95.541	0.389
comX	Streptococcus salivarius SK126	40.667	95.541	0.389
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	37.821	99.363	0.376
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	37.821	99.363	0.376
comX	Streptococcus sobrinus strain NIDR 6715-7	41.259	91.083	0.376
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	39.333	95.541	0.376
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	39.333	95.541	0.376
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	39.333	95.541	0.376
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	39.333	95.541	0.376