Detailed information NTG0404883

Bioinformatically predicted

Overview

• Name: comX/comX2
• Type: Regulator
• Locus tag: GOM48_RS00065
• Genome accession: NZ_CP046523
• Coordinates: 14254..14727 (+)
• Length: 157 a.a.
• NCBI ID: WP_197906202.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain SOD
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 9254..19727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOM48_RS00050 (GOM48_00050)	tilS	10335..11612 (+)	1278	WP_235097607.1	tRNA lysidine(34) synthetase TilS	-
GOM48_RS00055 (GOM48_00055)	hpt	11617..12159 (+)	543	WP_061418811.1	hypoxanthine phosphoribosyltransferase	-
GOM48_RS00060 (GOM48_00060)	ftsH	12175..14133 (+)	1959	WP_235097608.1	ATP-dependent zinc metalloprotease FtsH	-
GOM48_RS00065 (GOM48_00065)	comX/comX2	14254..14727 (+)	474	WP_197906202.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 19181.07 Da
• Isoelectric Point: 8.4595

>NTDB_id=404883 GOM48_RS00065 WP_197906202.1 14254..14727(+) (comX/comX2) [Streptococcus oralis strain SOD]
MNLKELYEESKGIVHKCRKEYHLHLWEKEDWDQEGMMCLYELVSHHPELLVGERRRLYVCFKTKFRNRILDYIRKQESHK
RRFDKEPYEEVSEISHRLGEKGLRLDDYYLFHELLKNYKASQGKEKQEQLERLMGGECFKGRKALLGELRVVLSDFR

Nucleotide

• Length: 474 bp

>NTDB_id=404883 GOM48_RS00065 WP_197906202.1 14254..14727(+) (comX/comX2) [Streptococcus oralis strain SOD]
ATGAATCTGAAAGAACTATACGAAGAAAGTAAGGGGATTGTCCATAAGTGCCGCAAAGAATACCATTTACATCTGTGGGA
GAAAGAGGACTGGGACCAGGAGGGGATGATGTGCCTGTATGAGCTGGTCAGTCACCATCCAGAGTTACTAGTTGGTGAAC
GTCGCCGACTATATGTCTGCTTTAAAACCAAATTCCGCAATCGCATCCTAGACTACATCCGCAAACAGGAAAGTCATAAG
CGCCGTTTCGATAAAGAACCCTATGAAGAGGTAAGCGAAATCAGCCATCGCCTAGGAGAAAAAGGCCTGAGACTGGATGA
TTATTATCTCTTTCATGAGCTTCTAAAGAATTACAAGGCAAGTCAGGGGAAAGAAAAACAAGAACAACTAGAACGTCTGA
TGGGAGGAGAATGTTTCAAAGGACGTAAGGCACTTCTAGGAGAATTAAGAGTGGTATTGAGTGATTTTAGATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/comX2	Streptococcus pneumoniae Rx1	65.584	98.089	0.643
comX/comX2	Streptococcus pneumoniae D39	65.584	98.089	0.643
comX/comX1	Streptococcus pneumoniae D39	65.584	98.089	0.643
comX/comX2	Streptococcus pneumoniae R6	65.584	98.089	0.643
comX/comX1	Streptococcus pneumoniae R6	65.584	98.089	0.643
comX/comX1	Streptococcus pneumoniae Rx1	65.584	98.089	0.643
comX/comX2	Streptococcus pneumoniae TIGR4	64.935	98.089	0.637
comX/comX1	Streptococcus pneumoniae TIGR4	64.935	98.089	0.637
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	64.286	98.089	0.631
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	64.286	98.089	0.631
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	63.636	98.089	0.624
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	62.987	98.089	0.618
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	53.205	99.363	0.529
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	53.205	99.363	0.529
comX/sigX	Streptococcus mutans UA159	47.368	96.815	0.459
comX/sigX	Streptococcus suis isolate S10	43.949	100	0.439
comX/sigX	Streptococcus suis D9	43.949	100	0.439
comX/sigX	Streptococcus suis P1/7	43.949	100	0.439
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	39.241	100	0.395
comX	Streptococcus thermophilus LMG 18311	40	95.541	0.382
comX	Streptococcus thermophilus LMD-9	40	95.541	0.382
comX/sigX	Streptococcus salivarius strain HSISS4	40	95.541	0.382
comX	Streptococcus salivarius SK126	40	95.541	0.382
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	37.821	99.363	0.376
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	37.821	99.363	0.376
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	39.333	95.541	0.376
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	39.333	95.541	0.376
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	39.333	95.541	0.376
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	39.333	95.541	0.376
comX	Streptococcus sobrinus strain NIDR 6715-7	40.559	91.083	0.369