Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | F1537_RS09240 | Genome accession | NZ_CP043770 |
| Coordinates | 1805151..1805663 (+) | Length | 170 a.a. |
| NCBI ID | WP_013526183.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae biotype aegyptius strain HE7/F1946 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1800151..1810663
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1537_RS09220 (F1537_09230) | nrfF | 1800448..1801605 (-) | 1158 | WP_013526187.1 | heme lyase NrfEFG subunit NrfF | - |
| F1537_RS09225 (F1537_09235) | - | 1801602..1802132 (-) | 531 | WP_013526186.1 | DsbE family thiol:disulfide interchange protein | - |
| F1537_RS09230 (F1537_09240) | nrfE | 1802132..1804039 (-) | 1908 | WP_013526185.1 | heme lyase NrfEFG subunit NrfE | - |
| F1537_RS09235 (F1537_09245) | suhB | 1804148..1804951 (-) | 804 | WP_013526184.1 | inositol-1-monophosphatase | - |
| F1537_RS09240 (F1537_09250) | comN | 1805151..1805663 (+) | 513 | WP_013526183.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| F1537_RS09245 (F1537_09255) | comO | 1805663..1806379 (+) | 717 | WP_013526182.1 | type II secretion system protein J | Machinery gene |
| F1537_RS09250 (F1537_09260) | comP | 1806394..1807077 (+) | 684 | WP_013526181.1 | DUF2572 family protein | Machinery gene |
| F1537_RS09255 (F1537_09265) | comQ | 1807070..1807357 (+) | 288 | WP_041174964.1 | DUF5374 domain-containing protein | Machinery gene |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 19849.10 Da Isoelectric Point: 8.9743
>NTDB_id=385789 F1537_RS09240 WP_013526183.1 1805151..1805663(+) (comN) [Haemophilus influenzae biotype aegyptius strain HE7/F1946]
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN
Nucleotide
Download Length: 513 bp
>NTDB_id=385789 F1537_RS09240 WP_013526183.1 1805151..1805663(+) (comN) [Haemophilus influenzae biotype aegyptius strain HE7/F1946]
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGCGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCACCTAAAACAATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGCGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCACCTAAAACAATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
99.412 |
100 |
0.994 |