Detailed information NTG0340557

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ETK61_RS12005
• Genome accession: NZ_CP035406
• Coordinates: 2222674..2223810 (+)
• Length: 378 a.a.
• NCBI ID: WP_042976277.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103612
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2217674..2228810

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETK61_RS11985 (ETK61_11990)	-	2219604..2220422 (+)	819	Protein_2301	hypothetical protein	-
ETK61_RS23680	-	2220402..2220638 (+)	237	WP_042976720.1	hypothetical protein	-
ETK61_RS11990 (ETK61_11995)	blyA	2220662..2221765 (+)	1104	WP_129137743.1	N-acetylmuramoyl-L-alanine amidase BlyA	-
ETK61_RS11995 (ETK61_12000)	-	2221882..2222274 (+)	393	WP_010328137.1	hypothetical protein	-
ETK61_RS12000 (ETK61_12005)	-	2222295..2222546 (+)	252	WP_042976275.1	phage holin	-
ETK61_RS12005 (ETK61_12010)	rapC	2222674..2223810 (+)	1137	WP_042976277.1	Rap family tetratricopeptide repeat protein	Regulator
ETK61_RS12010 (ETK61_12015)	-	2223800..2223985 (+)	186	WP_129137744.1	aspartate phosphatase	-
ETK61_RS12020 (ETK61_12025)	-	2224058..2225286 (+)	1229	Protein_2308	IS256-like element ISBsu2 family transposase	-
ETK61_RS12025 (ETK61_12030)	-	2225375..2226625 (-)	1251	WP_129137745.1	UV damage repair protein UvrX	-
ETK61_RS12030 (ETK61_12035)	-	2226618..2226950 (-)	333	WP_041336419.1	YolD-like family protein	-
ETK61_RS12035 (ETK61_12040)	-	2227118..2228116 (+)	999	WP_129137746.1	hypothetical protein	-
ETK61_RS12040 (ETK61_12045)	-	2228276..2228359 (+)	84	WP_106293871.1	putative holin-like toxin	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44874.19 Da
• Isoelectric Point: 5.2391

>NTDB_id=340557 ETK61_RS12005 WP_042976277.1 2222674..2223810(+) (rapC) [Bacillus subtilis strain SRCM103612]
MEQMISSSKVGVKINEWYKYIRLFSVPDSEILKAEVEEEIRHMKEDQDLLLYYSLMCFRHQLMLDYLEPKTLNEKRPKIS
DLLEKIESSQTDLKGILEYYFNFFRGMYEFEQYEYLNAISFYKQAERKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIDSYKAHENYTVRVIQCSFVIGLNYLDMDYPEKAIPHFKDALDKAREIDMSRLIGSSLYNLGLCSFAEEAYEKAS
EYFKEGIRVYQDNGYEHSNRILDILLMLTKTTFKMRNHSEGISWCAHGLSLSKNLNDEIMVKMFEFIHALYVDNDNEKLN
SILNYLELKSMLSDVEDLASDAAKYYNEKEDHKVAVAYYEKVLYARKQIQRGDCLYET

Nucleotide

• Length: 1137 bp

>NTDB_id=340557 ETK61_RS12005 WP_042976277.1 2222674..2223810(+) (rapC) [Bacillus subtilis strain SRCM103612]
TTGGAGCAGATGATCTCTTCTTCTAAAGTTGGAGTGAAAATAAATGAGTGGTATAAATACATAAGATTATTTAGTGTCCC
AGATTCGGAAATATTGAAAGCTGAGGTCGAGGAAGAAATAAGGCATATGAAAGAAGATCAAGATTTATTGCTGTACTATT
CTCTCATGTGTTTTCGCCATCAGCTGATGCTGGACTACCTTGAACCAAAAACATTGAACGAAAAACGACCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGTAGTCAAACTGATTTGAAAGGGATTCTTGAATATTATTTTAACTTTTTCCGGGGAAT
GTATGAATTTGAACAATACGAATATCTTAATGCCATAAGCTTCTATAAGCAAGCCGAGAGAAAATTATCACTTGTTGCAG
ATGAAATTGAAAGAGCTGAATTCCACTATAAAGTTGCAGAAATTTATTATCATATGAAGCAAACACATATGTCGATGCAC
CACATTGTTCAAGCAATCGATAGTTATAAAGCACATGAAAACTACACTGTAAGAGTTATTCAATGCTCATTTGTTATCGG
ACTGAACTATTTGGATATGGACTACCCTGAAAAAGCGATCCCTCATTTTAAAGATGCTCTAGATAAAGCAAGAGAAATCG
ATATGTCACGATTAATCGGATCATCTCTTTACAATCTCGGCTTATGTTCCTTTGCTGAGGAAGCTTATGAAAAGGCATCT
GAGTACTTCAAGGAGGGCATTAGAGTATATCAGGATAATGGGTATGAACATTCAAATCGCATATTAGATATCTTACTTAT
GTTGACAAAAACCACTTTTAAAATGAGAAATCACTCCGAGGGAATTTCTTGGTGTGCACACGGTCTGTCTTTGTCCAAAA
ATTTAAACGATGAGATTATGGTAAAAATGTTTGAATTCATTCATGCCTTATATGTAGATAATGACAATGAAAAATTAAAT
TCAATTCTAAATTATTTAGAATTAAAGTCAATGCTTTCAGACGTGGAGGATTTAGCATCAGATGCAGCGAAGTATTACAA
TGAAAAAGAAGACCATAAAGTGGCTGTTGCTTATTATGAAAAAGTGCTTTATGCCCGTAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAACTTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_8) (343-367)

• Tetratricopeptide repeat (TPR_8) (222-252)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	47.769	100	0.481
rapF	Bacillus subtilis subsp. subtilis str. 168	45.526	100	0.458