Detailed information NTG0299032

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DPM16_RS08150
• Genome accession: NZ_CP030086
• Coordinates: 1603328..1603996 (+)
• Length: 222 a.a.
• NCBI ID: WP_112236933.1
• Uniprot ID: -
• Organism: Polynucleobacter paneuropaeus strain MWH-Creno-4B4
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1598328..1608996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DPM16_RS08130 (DPM16_08130)	-	1599864..1600445 (-)	582	WP_112318544.1	DUF4390 domain-containing protein	-
DPM16_RS08135 (DPM16_08135)	rsmB	1600442..1601800 (-)	1359	WP_227868593.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
DPM16_RS08140 (DPM16_08140)	fmt	1601742..1602731 (-)	990	WP_112208670.1	methionyl-tRNA formyltransferase	-
DPM16_RS08145 (DPM16_08145)	def	1602741..1603256 (-)	516	WP_112318546.1	peptide deformylase	-
DPM16_RS08150 (DPM16_08150)	dprA	1603328..1603996 (+)	669	WP_112236933.1	DNA-processing protein DprA	Machinery gene
DPM16_RS08155 (DPM16_08155)	-	1604214..1606877 (+)	2664	WP_112318547.1	DNA topoisomerase III	-
DPM16_RS08345 (DPM16_08160)	mnmC	1606850..1607938 (-)	1089	Protein_1594	FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	-

Sequence

Protein

• Length: 222 a.a.
• Molecular weight: 23326.28 Da
• Isoelectric Point: 7.9370

>NTDB_id=299032 DPM16_RS08150 WP_112236933.1 1603328..1603996(+) (dprA) [Polynucleobacter paneuropaeus strain MWH-Creno-4B4]
MKNELPANSILPLALGATNYPKRLLDLADPPRTIYIAGKIELLSVPMIAIVGSRVASPEGIKNAGYFARTLASEGLLVIS
GLARGIDGASHRAALAVGQPTLAICGTGLDLTYPPEHHELANEIQKNGLLLGELPLGIGPKAFHFPRRNRLIAALAIGVL
VVEAAQQSGSLITARLALELGREVFAIPSSIHSPLSAGCHYLIGQGAKLVASPKEVLEELIY

Nucleotide

• Length: 669 bp

>NTDB_id=299032 DPM16_RS08150 WP_112236933.1 1603328..1603996(+) (dprA) [Polynucleobacter paneuropaeus strain MWH-Creno-4B4]
ATGAAAAATGAACTGCCAGCCAACTCTATTTTGCCCCTAGCTTTAGGTGCTACAAACTATCCCAAACGCCTTCTTGACTT
GGCCGATCCTCCGCGCACTATTTATATAGCAGGAAAAATAGAGTTGCTGAGTGTGCCCATGATCGCTATTGTTGGCTCTC
GGGTAGCTAGCCCCGAAGGAATCAAAAATGCTGGTTACTTTGCTAGAACCCTTGCCAGCGAGGGCCTACTAGTCATTTCT
GGCTTGGCCAGGGGCATTGATGGGGCTTCGCACCGGGCAGCCCTTGCGGTGGGCCAACCCACATTAGCAATCTGCGGCAC
CGGCCTAGATCTCACCTACCCACCTGAACATCATGAGTTAGCGAATGAAATTCAGAAAAATGGTCTTTTATTGGGCGAGC
TGCCCTTAGGCATCGGACCCAAGGCCTTTCACTTCCCGCGTCGCAACCGCCTGATTGCAGCACTGGCCATAGGGGTTTTA
GTGGTAGAAGCCGCTCAGCAATCGGGCTCACTTATTACGGCCCGCCTTGCATTGGAATTGGGCAGAGAAGTTTTTGCCAT
ACCCTCCTCAATTCACAGCCCCTTGTCTGCTGGATGTCACTATTTAATTGGGCAAGGGGCAAAACTGGTCGCCTCTCCAA
AAGAAGTTCTGGAAGAGCTGATTTATTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (14-211)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Legionella pneumophila strain ERS1305867	51.923	93.694	0.486
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	45.909	99.099	0.455
dprA/cilB/dalA	Streptococcus pneumoniae D39	45.909	99.099	0.455
dprA/cilB/dalA	Streptococcus pneumoniae R6	45.909	99.099	0.455
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	45.909	99.099	0.455
dprA/cilB/dalA	Streptococcus mitis SK321	45.909	99.099	0.455
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	45.909	99.099	0.455
dprA	Neisseria meningitidis strain C311	49.268	92.342	0.455
dprA	Neisseria meningitidis MC58	49.268	92.342	0.455
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.534	100	0.455
dprA	Vibrio campbellii strain DS40M4	48.077	93.694	0.45
dprA	Vibrio cholerae strain A1552	49.254	90.541	0.446
dprA	Neisseria gonorrhoeae MS11	48.756	90.541	0.441
dprA	Acinetobacter baumannii strain A118	48.039	91.892	0.441
dprA	Neisseria gonorrhoeae strain FA1090	48.756	90.541	0.441
dprA	Acinetobacter baumannii D1279779	48.039	91.892	0.441
dprA	Glaesserella parasuis strain SC1401	46.445	95.045	0.441
dprA	Streptococcus mutans UA159	44.091	99.099	0.437
dprA	Lactococcus lactis subsp. cremoris KW2	47.783	91.441	0.437
dprA	Thermus thermophilus HB27	46.154	93.694	0.432
dprA	Haemophilus influenzae Rd KW20	45.545	90.991	0.414
dprA	Acinetobacter baylyi ADP1	45.545	90.991	0.414
dprA	Bacillus subtilis subsp. subtilis str. 168	39.713	94.144	0.374
dprA	Latilactobacillus sakei subsp. sakei 23K	39.216	91.892	0.36