Detailed information NTG0257932

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: A7J09_RS00590
• Genome accession: NZ_CP030015
• Coordinates: 100138..100608 (+)
• Length: 156 a.a.
• NCBI ID: WP_024393242.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ISU2812
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 95138..105608

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A7J09_RS00565 (A7J09_00570)	rpsK	95479..95862 (+)	384	WP_004195509.1	30S ribosomal protein S11	-
A7J09_RS00570 (A7J09_00575)	-	95907..96845 (+)	939	WP_004195512.1	DNA-directed RNA polymerase subunit alpha	-
A7J09_RS00575 (A7J09_00580)	rplQ	96860..97246 (+)	387	WP_000331493.1	50S ribosomal protein L17	-
A7J09_RS00580 (A7J09_00585)	-	97451..98707 (-)	1257	WP_148124286.1	ISL3 family transposase	-
A7J09_RS00585 (A7J09_00595)	-	98980..99835 (+)	856	Protein_96	IS982 family transposase	-
A7J09_RS00590 (A7J09_00600)	comX/sigX	100138..100608 (+)	471	WP_024393242.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 19116.98 Da
• Isoelectric Point: 8.4522

>NTDB_id=257932 A7J09_RS00590 WP_024393242.1 100138..100608(+) (comX/sigX) [Streptococcus suis strain ISU2812]
MEFEKVYASVKGIVNKARKEFYIKLWDRDDWEQEGMMTLFELLEDQPWLVDEQVQLYCYFKVKFRNRIKDRIRKQESQKR
KFDRMPHEDIHELSHAIQSPGLINDELLMLRGALRDYRKNLSNDQLDKYEKLISGQCFNGRREMIRDLQIHLKDFR

Nucleotide

• Length: 471 bp

>NTDB_id=257932 A7J09_RS00590 WP_024393242.1 100138..100608(+) (comX/sigX) [Streptococcus suis strain ISU2812]
ATGGAATTCGAAAAAGTGTACGCAAGCGTCAAAGGCATTGTAAACAAGGCTCGAAAAGAGTTTTACATTAAACTATGGGA
TCGAGATGATTGGGAACAAGAAGGAATGATGACCTTGTTTGAATTGTTGGAAGATCAACCGTGGCTAGTTGATGAACAAG
TTCAATTATATTGTTATTTCAAAGTCAAGTTCAGAAATCGAATCAAGGATCGTATCCGCAAACAGGAAAGTCAAAAACGC
AAGTTTGACCGTATGCCACATGAAGATATTCACGAATTATCTCACGCAATACAATCACCGGGATTGATAAACGATGAATT
ATTAATGTTGAGAGGTGCCTTGAGAGATTATCGAAAAAATCTGAGCAATGATCAACTTGATAAATACGAAAAATTAATTA
GCGGACAATGTTTTAATGGTCGCCGTGAAATGATACGTGATTTACAAATTCATTTGAAAGACTTTCGCTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus suis D9	99.359	100	0.994
comX/sigX	Streptococcus suis isolate S10	98.718	100	0.987
comX/sigX	Streptococcus suis P1/7	98.718	100	0.987
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	49.032	99.359	0.487
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	49.032	99.359	0.487
comX/comX1	Streptococcus pneumoniae TIGR4	46.358	96.795	0.449
comX/comX2	Streptococcus pneumoniae TIGR4	46.358	96.795	0.449
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	45.752	98.077	0.449
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	45.098	98.077	0.442
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	45.098	98.077	0.442
comX/comX1	Streptococcus pneumoniae Rx1	45.695	96.795	0.442
comX/comX2	Streptococcus pneumoniae D39	45.695	96.795	0.442
comX/comX1	Streptococcus pneumoniae D39	45.695	96.795	0.442
comX/comX2	Streptococcus pneumoniae R6	45.695	96.795	0.442
comX/comX1	Streptococcus pneumoniae R6	45.695	96.795	0.442
comX/comX2	Streptococcus pneumoniae Rx1	45.695	96.795	0.442
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	44.444	98.077	0.436
comX/sigX	Streptococcus mutans UA159	43.226	99.359	0.429
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	40.645	99.359	0.404
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	40.645	99.359	0.404
comX	Streptococcus sobrinus strain NIDR 6715-7	40.523	98.077	0.397
comX	Streptococcus thermophilus LMG 18311	40.523	98.077	0.397
comX	Streptococcus thermophilus LMD-9	40.523	98.077	0.397
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	40	99.359	0.397
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	40	99.359	0.397
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	40	99.359	0.397
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	40	99.359	0.397
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	38.854	100	0.391
comX	Streptococcus salivarius SK126	39.869	98.077	0.391
comX/sigX	Streptococcus salivarius strain HSISS4	39.869	98.077	0.391