Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   CVO91_RS00510 Genome accession   NZ_CP024974
Coordinates   83339..83809 (+) Length   156 a.a.
NCBI ID   WP_004195486.1    Uniprot ID   A0A2I5KCL7
Organism   Streptococcus suis strain CZ130302     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 78339..88809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVO91_RS00480 (CVO91_00480) recA 79552..80703 (+) 1152 WP_004195473.1 recombinase RecA Machinery gene
  CVO91_RS00485 (CVO91_00485) spx 80863..81261 (+) 399 WP_004195475.1 transcriptional regulator Spx -
  CVO91_RS00490 (CVO91_00490) - 81368..81634 (+) 267 WP_004195477.1 IreB family regulatory phosphoprotein -
  CVO91_RS00495 (CVO91_00495) ruvX 81634..82053 (+) 420 WP_032498174.1 Holliday junction resolvase RuvX -
  CVO91_RS00500 (CVO91_00500) - 82065..82382 (+) 318 WP_004195480.1 DUF1292 domain-containing protein -
  CVO91_RS00505 (CVO91_00505) - 82692..83237 (+) 546 Protein_77 nucleotidyltransferase family protein -
  CVO91_RS00510 (CVO91_00510) comX/sigX 83339..83809 (+) 471 WP_004195486.1 sigma-70 family RNA polymerase sigma factor Regulator
  CVO91_RS00515 (CVO91_00515) rpsJ 84064..84372 (+) 309 WP_014735259.1 30S ribosomal protein S10 -
  CVO91_RS00520 (CVO91_00520) rplC 84469..85095 (+) 627 WP_004195488.1 50S ribosomal protein L3 -
  CVO91_RS00525 (CVO91_00525) rplD 85120..85743 (+) 624 WP_004195490.1 50S ribosomal protein L4 -
  CVO91_RS00530 (CVO91_00530) - 85743..86042 (+) 300 WP_024379978.1 50S ribosomal protein L23 -
  CVO91_RS00535 (CVO91_00535) rplB 86060..86893 (+) 834 WP_024379979.1 50S ribosomal protein L2 -
  CVO91_RS00540 (CVO91_00540) rpsS 87144..87425 (+) 282 WP_000533766.1 30S ribosomal protein S19 -
  CVO91_RS00545 (CVO91_00545) rplV 87443..87787 (+) 345 WP_002936662.1 50S ribosomal protein L22 -
  CVO91_RS00550 (CVO91_00550) rpsC 87800..88453 (+) 654 WP_002936661.1 30S ribosomal protein S3 -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 19247.04 Da        Isoelectric Point: 7.8584

>NTDB_id=256904 CVO91_RS00510 WP_004195486.1 83339..83809(+) (comX/sigX) [Streptococcus suis strain CZ130302]
MEFEKVYDSVKGIVNKARKEYYIKLWEKEDWDQEGMMTLFELLEDQPWLADEQEQLYCYFKVKFRNRVKDRVRRQESQKR
KFDRMPHEDIHDLSHVIQSPGLVNDELLMLRGALRDYRKKLSNDQLENYEKLISGQCFRGRREMIRDLQIYLKDFR

Nucleotide


Download         Length: 471 bp        

>NTDB_id=256904 CVO91_RS00510 WP_004195486.1 83339..83809(+) (comX/sigX) [Streptococcus suis strain CZ130302]
ATGGAATTTGAAAAGGTCTATGATAGCGTAAAAGGGATTGTCAACAAGGCTCGAAAAGAGTACTATATTAAATTATGGGA
AAAGGAAGATTGGGATCAAGAGGGCATGATGACCTTATTTGAATTATTGGAAGATCAACCGTGGTTAGCTGATGAGCAAG
AACAGTTGTATTGCTATTTTAAAGTGAAATTTAGAAATCGGGTCAAAGACCGTGTACGCAGACAAGAAAGTCAGAAGCGT
AAGTTTGACCGCATGCCACATGAAGACATTCATGATTTATCTCACGTTATACAATCGCCAGGTTTAGTCAATGACGAGCT
GTTAATGTTGAGAGGGGCCTTGAGAGATTATCGAAAAAAACTAAGCAATGACCAGCTTGAAAATTATGAAAAACTAATTA
GTGGCCAATGTTTCCGTGGTCGCCGTGAAATGATTCGCGATTTACAAATCTATTTAAAAGACTTTCGCTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2I5KCL7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comX/sigX Streptococcus suis D9

87.179

100

0.872
  comX/sigX Streptococcus suis isolate S10

86.538

100

0.865
  comX/sigX Streptococcus suis P1/7

86.538

100

0.865
  comR/comR2 Streptococcus gordonii str. Challis substr. CH1

48.387

99.359

0.481
  comR/comR1 Streptococcus gordonii str. Challis substr. CH1

48.387

99.359

0.481
  comX/sigX/comX1/sigX1 Streptococcus mitis SK321

47.059

98.077

0.462
  comX/sigX/comX2/sigX2 Streptococcus mitis NCTC 12261

46.405

98.077

0.455
  comX/comX2 Streptococcus pneumoniae Rx1

46.358

96.795

0.449
  comX/comX1 Streptococcus pneumoniae R6

46.358

96.795

0.449
  comX/comX2 Streptococcus pneumoniae D39

46.358

96.795

0.449
  comX/comX1 Streptococcus pneumoniae D39

46.358

96.795

0.449
  comX/comX2 Streptococcus pneumoniae R6

46.358

96.795

0.449
  comX/comX1 Streptococcus pneumoniae Rx1

46.358

96.795

0.449
  comX/sigX/comX2/sigX2 Streptococcus mitis SK321

45.752

98.077

0.449
  comX/sigX/comX1/sigX1 Streptococcus mitis NCTC 12261

45.098

98.077

0.442
  comX/comX2 Streptococcus pneumoniae TIGR4

45.695

96.795

0.442
  comX/comX1 Streptococcus pneumoniae TIGR4

45.695

96.795

0.442
  comX/sigX Streptococcus mutans UA159

43.226

99.359

0.429
  comX Streptococcus thermophilus LMD-9

41.83

98.077

0.41
  comX Streptococcus thermophilus LMG 18311

41.83

98.077

0.41
  comX/sigX Streptococcus infantarius subsp. infantarius ATCC BAA-102

40.127

100

0.404
  comX/sigX Streptococcus salivarius strain HSISS4

41.176

98.077

0.404
  comX Streptococcus salivarius SK126

41.176

98.077

0.404
  comX Streptococcus sobrinus strain NIDR 6715-7

40.523

98.077

0.397
  comX/sigX/comX1/sigX1 Streptococcus pyogenes MGAS315

40

99.359

0.397
  comX/sigX/comX2/sigX2 Streptococcus pyogenes MGAS315

40

99.359

0.397
  comX/sigX/comX1/sigX1 Streptococcus pyogenes MGAS8232

39.355

99.359

0.391
  comX/sigX/comX2/sigX2 Streptococcus pyogenes MGAS8232

39.355

99.359

0.391
  comX/sigX/comX1/sigX1 Streptococcus pyogenes JRS4

39.355

99.359

0.391
  comX/sigX/comX2/sigX2 Streptococcus pyogenes JRS4

39.355

99.359

0.391

Multiple sequence alignment