Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   C5Y81_RS02200 Genome accession   NZ_CP028470
Coordinates   465117..465920 (+) Length   267 a.a.
NCBI ID   WP_052997691.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IT4-R     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 460117..470920
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5Y81_RS02180 (C5Y81_02180) - 461663..463000 (+) 1338 WP_000812832.1 aminotransferase class V-fold PLP-dependent enzyme -
  C5Y81_RS02185 (C5Y81_02185) tmk 463002..463619 (+) 618 WP_001272126.1 dTMP kinase -
  C5Y81_RS02190 (C5Y81_02190) - 463647..463976 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  C5Y81_RS02195 (C5Y81_02195) - 464190..465116 (+) 927 WP_000344337.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  C5Y81_RS02200 (C5Y81_02200) yaaT 465117..465920 (+) 804 WP_052997691.1 stage 0 sporulation family protein Regulator
  C5Y81_RS02205 (C5Y81_02205) yabA 465937..466284 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  C5Y81_RS02210 (C5Y81_02210) - 466558..467283 (+) 726 WP_000910684.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  C5Y81_RS02215 (C5Y81_02215) - 467276..467524 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  C5Y81_RS02220 (C5Y81_02220) rsmI 467526..468365 (+) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  C5Y81_RS02225 (C5Y81_02225) metG 468650..470623 (+) 1974 WP_001051129.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30190.81 Da        Isoelectric Point: 4.5759

>NTDB_id=241550 C5Y81_RS02200 WP_052997691.1 465117..465920(+) (yaaT) [Staphylococcus aureus strain IT4-R]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRVADDKDIDKFNCNER
DAENGLILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=241550 C5Y81_RS02200 WP_052997691.1 465117..465920(+) (yaaT) [Staphylococcus aureus strain IT4-R]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCGTTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGGATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGGGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

62.738

98.502

0.618

Multiple sequence alignment