Detailed information NTG0223196

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: A6J85_RS06035
• Genome accession: NZ_CP020450
• Coordinates: 1205958..1206440 (+)
• Length: 160 a.a.
• NCBI ID: WP_048778891.1
• Uniprot ID: A0AB35FPE6
• Organism: Streptococcus gordonii strain FDAARGOS_257
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1200958..1211440

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J85_RS06015 (A6J85_05950)	amiC	1201326..1202822 (+)	1497	WP_048777855.1	ABC transporter permease	Regulator
A6J85_RS06020 (A6J85_05955)	amiD	1202822..1203748 (+)	927	WP_008809623.1	oligopeptide ABC transporter permease OppC	Regulator
A6J85_RS06025 (A6J85_05960)	amiE	1203757..1204824 (+)	1068	WP_008809622.1	ABC transporter ATP-binding protein	Regulator
A6J85_RS06030 (A6J85_05965)	amiF	1204835..1205758 (+)	924	WP_012130756.1	ATP-binding cassette domain-containing protein	Regulator
A6J85_RS06035 (A6J85_05970)	comR/comR2	1205958..1206440 (+)	483	WP_048778891.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 19930.88 Da
• Isoelectric Point: 9.6143

>NTDB_id=223196 A6J85_RS06035 WP_048778891.1 1205958..1206440(+) (comR/comR2) [Streptococcus gordonii strain FDAARGOS_257]
MKFEDVYKQVEGIVKRCYKDYYLHLWEYADWRQEGMLVLYELLKSHPNLLEDHPRLYRYFKTKFRNRIHDLIRRQESQKR
KLDRQPYEEVSEIGHRLRMKELYLDELVAFRSAMAEYRSQLSPEESKQYERLMADERFKGRKAMLKNLSYHLRDFNPRLD

Nucleotide

• Length: 483 bp

>NTDB_id=223196 A6J85_RS06035 WP_048778891.1 1205958..1206440(+) (comR/comR2) [Streptococcus gordonii strain FDAARGOS_257]
ATGAAGTTTGAGGACGTATACAAACAAGTTGAAGGGATAGTCAAGCGCTGTTATAAAGATTATTATCTGCACTTATGGGA
GTATGCAGATTGGAGGCAGGAAGGAATGTTGGTGTTGTACGAATTATTAAAAAGTCATCCCAACCTACTGGAAGATCATC
CACGCCTGTACCGTTACTTCAAGACCAAGTTTCGGAACAGAATTCATGATTTGATTCGTCGCCAAGAGAGTCAAAAGCGG
AAATTGGACAGGCAACCCTATGAAGAGGTCAGCGAGATAGGTCATCGTTTAAGAATGAAAGAGCTGTATCTGGATGAATT
GGTAGCCTTTAGAAGTGCAATGGCAGAGTATAGAAGTCAGCTCAGTCCAGAAGAATCAAAACAATATGAGCGTCTGATGG
CAGATGAAAGGTTCAAAGGACGTAAGGCAATGCTCAAAAATCTATCCTATCACTTAAGGGATTTCAATCCCCGTTTAGAT
TAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	96.875	100	0.969
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	96.875	100	0.969
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	49.359	97.5	0.481
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	48.718	97.5	0.475
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	48.718	97.5	0.475
comX/comX1	Streptococcus pneumoniae Rx1	48.077	97.5	0.469
comX/comX2	Streptococcus pneumoniae D39	48.077	97.5	0.469
comX/comX1	Streptococcus pneumoniae D39	48.077	97.5	0.469
comX/comX2	Streptococcus pneumoniae R6	48.077	97.5	0.469
comX/comX1	Streptococcus pneumoniae R6	48.077	97.5	0.469
comX/comX1	Streptococcus pneumoniae TIGR4	48.077	97.5	0.469
comX/comX2	Streptococcus pneumoniae Rx1	48.077	97.5	0.469
comX/comX2	Streptococcus pneumoniae TIGR4	48.077	97.5	0.469
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	47.436	97.5	0.463
comX/sigX	Streptococcus suis P1/7	47.742	96.875	0.463
comX/sigX	Streptococcus suis D9	47.742	96.875	0.463
comX/sigX	Streptococcus suis isolate S10	47.742	96.875	0.463
comX/sigX	Streptococcus mutans UA159	46.795	97.5	0.456
comX	Streptococcus thermophilus LMG 18311	43.871	96.875	0.425
comX	Streptococcus thermophilus LMD-9	43.871	96.875	0.425
comX/sigX	Streptococcus salivarius strain HSISS4	43.226	96.875	0.419
comX	Streptococcus salivarius SK126	43.226	96.875	0.419
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	42.208	96.25	0.406
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	42.208	96.25	0.406
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	40.506	98.75	0.4
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	41.558	96.25	0.4
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	41.558	96.25	0.4
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	41.558	96.25	0.4
comX	Streptococcus sobrinus strain NIDR 6715-7	41.558	96.25	0.4
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	41.558	96.25	0.4