Detailed information    

insolico Bioinformatically predicted

Overview


Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   MGAS11027_RS07475 Genome accession   NZ_CP013838
Coordinates   1517251..1517736 (-) Length   161 a.a.
NCBI ID   WP_002988129.1    Uniprot ID   A0A6C2W3T2
Organism   Streptococcus pyogenes strain MGAS11027     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1512251..1522736
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGAS11027_RS07450 (MGAS11027_1522) - 1513617..1514462 (+) 846 WP_002982833.1 mechanosensitive ion channel family protein -
  MGAS11027_RS07455 (MGAS11027_1523) - 1514527..1515087 (-) 561 WP_031488688.1 TIGR01440 family protein -
  MGAS11027_RS07460 (MGAS11027_1524) - 1515101..1515571 (-) 471 WP_031488687.1 ECF transporter S component -
  MGAS11027_RS07465 (MGAS11027_1525) - 1515561..1516325 (-) 765 WP_031488686.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  MGAS11027_RS07470 (MGAS11027_1526) truA 1516315..1517064 (-) 750 WP_002988132.1 tRNA pseudouridine(38-40) synthase TruA -
  MGAS11027_RS07475 (MGAS11027_1527) comX/sigX/comX2/sigX2 1517251..1517736 (-) 486 WP_002988129.1 competence protein ComX Regulator

Sequence


Protein


Download         Length: 161 a.a.        Molecular weight: 19669.68 Da        Isoelectric Point: 9.5784

>NTDB_id=165032 MGAS11027_RS07475 WP_002988129.1 1517251..1517736(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain MGAS11027]
MSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERLYRYFKTKFSSYLKDLLRRQESQ
KRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGERFKGRRALLRKISPYFKEFAQQ
L

Nucleotide


Download         Length: 486 bp        

>NTDB_id=165032 MGAS11027_RS07475 WP_002988129.1 1517251..1517736(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain MGAS11027]
ATGTCGATAGAGACAAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATT
GTGGGATAGAGATGACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGG
AAGAAGAGCGTTTATATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAA
AAGCGTCAGTTCCATAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGA
CGACTATGTGGCTTATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCAC
TTATCAGGGGCGAACGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAG
TTGTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6C2W3T2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comX/sigX/comX2/sigX2 Streptococcus pyogenes JRS4

100

100

1

  comX/sigX/comX1/sigX1 Streptococcus pyogenes JRS4

100

100

1

  comX/sigX/comX1/sigX1 Streptococcus pyogenes MGAS315

99.379

100

0.994

  comX/sigX/comX1/sigX1 Streptococcus pyogenes MGAS8232

99.379

100

0.994

  comX/sigX/comX2/sigX2 Streptococcus pyogenes MGAS315

99.379

100

0.994

  comX/sigX/comX2/sigX2 Streptococcus pyogenes MGAS8232

99.379

100

0.994

  comX/sigX Streptococcus infantarius subsp. infantarius ATCC BAA-102

49.333

93.168

0.46

  comX Streptococcus sobrinus strain NIDR 6715-7

46.104

95.652

0.441

  comX/sigX Streptococcus mutans UA159

44.444

95.031

0.422

  comX Streptococcus thermophilus LMD-9

42.667

93.168

0.398

  comX Streptococcus salivarius SK126

42.667

93.168

0.398

  comX Streptococcus thermophilus LMG 18311

42.667

93.168

0.398

  comX/sigX Streptococcus salivarius strain HSISS4

42.667

93.168

0.398

  comX/sigX/comX2/sigX2 Streptococcus mitis SK321

42.953

92.547

0.398

  comX/sigX/comX2/sigX2 Streptococcus mitis NCTC 12261

42.282

92.547

0.391

  comR/comR1 Streptococcus gordonii str. Challis substr. CH1

40.26

95.652

0.385

  comR/comR2 Streptococcus gordonii str. Challis substr. CH1

40.26

95.652

0.385

  comX/sigX Streptococcus suis isolate S10

40

96.273

0.385

  comX/sigX Streptococcus suis D9

40

96.273

0.385

  comX/sigX Streptococcus suis P1/7

40

96.273

0.385

  comX/sigX/comX1/sigX1 Streptococcus mitis SK321

40.94

92.547

0.379

  comX/comX2 Streptococcus pneumoniae Rx1

40

93.168

0.373

  comX/comX2 Streptococcus pneumoniae R6

40

93.168

0.373

  comX/comX1 Streptococcus pneumoniae R6

40

93.168

0.373

  comX/comX2 Streptococcus pneumoniae TIGR4

40

93.168

0.373

  comX/comX1 Streptococcus pneumoniae TIGR4

40

93.168

0.373

  comX/comX2 Streptococcus pneumoniae D39

40

93.168

0.373

  comX/comX1 Streptococcus pneumoniae Rx1

40

93.168

0.373

  comX/comX1 Streptococcus pneumoniae D39

40

93.168

0.373

  comX/sigX/comX1/sigX1 Streptococcus mitis NCTC 12261

40.268

92.547

0.373


Multiple sequence alignment