Detailed information NTG0154573

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: AMM49_RS00775
• Genome accession: NZ_CP012480
• Coordinates: 107860..108339 (+)
• Length: 159 a.a.
• NCBI ID: WP_001204193.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain NGBS128
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 102860..113339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AMM49_RS11270 (AMM49_00740)	-	104048..104479 (+)	432	WP_000761051.1	hypothetical protein	-
AMM49_RS00750 (AMM49_00745)	-	104549..104752 (+)	204	WP_000840976.1	hypothetical protein	-
AMM49_RS00755 (AMM49_00750)	-	104903..105343 (+)	441	WP_000716196.1	hypothetical protein	-
AMM49_RS00760 (AMM49_00755)	-	105336..105680 (+)	345	WP_000073534.1	hypothetical protein	-
AMM49_RS00765 (AMM49_00760)	-	106470..107021 (+)	552	WP_000161849.1	nucleotidyltransferase family protein	-
AMM49_RS00770 (AMM49_00765)	-	107241..107660 (+)	420	WP_000784700.1	YjdF family protein	-
AMM49_RS00775 (AMM49_00770)	comX/sigX	107860..108339 (+)	480	WP_001204193.1	sigma-70 family RNA polymerase sigma factor	Regulator
AMM49_RS00780 (AMM49_00775)	-	108461..109153 (+)	693	WP_000049277.1	histidine phosphatase family protein	-
AMM49_RS00785 (AMM49_00780)	-	109150..109902 (+)	753	WP_000739666.1	M15 family metallopeptidase	-
AMM49_RS00790 (AMM49_00785)	-	109899..110474 (+)	576	WP_001231504.1	glycoside hydrolase family 73 protein	-
AMM49_RS00795 (AMM49_00790)	hrcA	110617..111651 (+)	1035	WP_001873813.1	heat-inducible transcriptional repressor HrcA	-
AMM49_RS00800 (AMM49_00795)	grpE	111654..112226 (+)	573	WP_001869793.1	nucleotide exchange factor GrpE	-

Sequence

Protein

• Length: 159 a.a.
• Molecular weight: 19473.36 Da
• Isoelectric Point: 7.2741

>NTDB_id=154573 AMM49_RS00775 WP_001204193.1 107860..108339(+) (comX/sigX) [Streptococcus agalactiae strain NGBS128]
MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQK
RQFNKMPYEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKFEKLINGERFAGKKKFIRNIQPFFNAFKAD

Nucleotide

• Length: 480 bp

>NTDB_id=154573 AMM49_RS00775 WP_001204193.1 107860..108339(+) (comX/sigX) [Streptococcus agalactiae strain NGBS128]
TTGAGAGATTTTGAGGAGTTGTTTGATAAAGTAAAGCCAATCGTAATGAAGCTGAGAAGAAATTATTTTGTTCAACTTTG
GGAATATGATGATTGGATTCAAGAAGGACGTATTGTACTTTTTAGGTTGCTTGAAGAGCATCCGTATTTATTGGATAATG
AAAGCAAACTATTCATTTACTTTAAAACAAAATTTTCAAATTATTTAAACGATGTATTAAGACACCAAGATTGTCAAAAG
CGACAATTTAATAAAATGCCTTATGAAGAAATCAGTGAAGTTAGTCATTATGTTAAGAGTAAAGGACTAGTTTTAGATGA
CTATATTGCTTATCGTGATACTTTAACAAAAGTGGAAGAAACTTTGTCAGATATTGATAAAGAAAAATTTGAAAAACTGA
TTAATGGTGAACGTTTTGCGGGGAAGAAAAAATTCATACGAAATATTCAACCTTTTTTCAATGCTTTTAAAGCGGATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	56.688	98.742	0.56
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	52.349	93.711	0.491
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	52.349	93.711	0.491
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	52.349	93.711	0.491
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	52.349	93.711	0.491
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	52	94.34	0.491
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	52	94.34	0.491
comX/sigX	Streptococcus mutans UA159	49.032	97.484	0.478
comX	Streptococcus sobrinus strain NIDR 6715-7	42.949	98.113	0.421
comX/sigX	Streptococcus suis isolate S10	41.935	97.484	0.409
comX/sigX	Streptococcus suis P1/7	41.935	97.484	0.409
comX/sigX	Streptococcus suis D9	41.935	97.484	0.409
comX	Streptococcus thermophilus LMD-9	42.857	92.453	0.396
comX	Streptococcus thermophilus LMG 18311	42.857	92.453	0.396
comX/sigX	Streptococcus salivarius strain HSISS4	41.497	92.453	0.384
comX	Streptococcus salivarius SK126	41.497	92.453	0.384
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	39.216	96.226	0.377
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	39.216	96.226	0.377
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	39.216	96.226	0.377
comX/comX1	Streptococcus pneumoniae D39	39.073	94.969	0.371
comX/comX2	Streptococcus pneumoniae R6	39.073	94.969	0.371
comX/comX1	Streptococcus pneumoniae R6	39.073	94.969	0.371
comX/comX2	Streptococcus pneumoniae TIGR4	39.073	94.969	0.371
comX/comX2	Streptococcus pneumoniae Rx1	39.073	94.969	0.371
comX/comX1	Streptococcus pneumoniae Rx1	39.073	94.969	0.371
comX/comX2	Streptococcus pneumoniae D39	39.073	94.969	0.371
comX/comX1	Streptococcus pneumoniae TIGR4	39.073	94.969	0.371
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	38.562	96.226	0.371
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	38.562	96.226	0.371
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	37.908	96.226	0.365