Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | HZ99_RS15535 | Genome accession | NZ_CP008896 |
| Coordinates | 3471410..3472444 (-) | Length | 344 a.a. |
| NCBI ID | WP_038444143.1 | Uniprot ID | - |
| Organism | Pseudomonas fluorescens strain UK4 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3466410..3477444
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZ99_RS15505 (HZ99_15880) | ruvX | 3466484..3466921 (+) | 438 | WP_005792259.1 | Holliday junction resolvase RuvX | - |
| HZ99_RS15510 (HZ99_15885) | pyrR | 3467004..3467510 (+) | 507 | WP_038444133.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| HZ99_RS15515 (HZ99_15890) | - | 3467535..3468539 (+) | 1005 | WP_038444135.1 | aspartate carbamoyltransferase catalytic subunit | - |
| HZ99_RS15520 (HZ99_15895) | - | 3468536..3469807 (+) | 1272 | WP_038444137.1 | dihydroorotase | - |
| HZ99_RS15525 (HZ99_15900) | - | 3469952..3470380 (-) | 429 | WP_038444139.1 | NINE protein | - |
| HZ99_RS15530 (HZ99_15905) | - | 3470630..3471268 (+) | 639 | WP_038444141.1 | C40 family peptidase | - |
| HZ99_RS15535 (HZ99_15910) | pilT | 3471410..3472444 (-) | 1035 | WP_038444143.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| HZ99_RS15540 (HZ99_15915) | - | 3472502..3473188 (+) | 687 | WP_038444144.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| HZ99_RS15545 (HZ99_15920) | proC | 3473223..3474041 (+) | 819 | WP_038444146.1 | pyrroline-5-carboxylate reductase | - |
| HZ99_RS15550 (HZ99_15925) | - | 3474051..3474641 (+) | 591 | WP_038444147.1 | YggT family protein | - |
| HZ99_RS15555 (HZ99_15930) | metX | 3474804..3475943 (+) | 1140 | WP_038444149.1 | homoserine O-succinyltransferase MetX | - |
| HZ99_RS15560 (HZ99_15935) | metW | 3475951..3476571 (+) | 621 | WP_029300485.1 | methionine biosynthesis protein MetW | - |
| HZ99_RS15565 (HZ99_15940) | - | 3476593..3477027 (+) | 435 | WP_038444151.1 | DUF4426 domain-containing protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 37393.11 Da Isoelectric Point: 7.3196
>NTDB_id=125526 HZ99_RS15535 WP_038444143.1 3471410..3472444(-) (pilT) [Pseudomonas fluorescens strain UK4]
MDITELLAASVSRGASDLHLSAGLAPRMRVDGEVVPLDWPLLSATQVADLLSPLLNKHQQKDFETSLETDFSFELPGVAR
FRANVFQQHRGMGAVFRAIPSRVQGLETLGLGDIFRRIAELPKGLVLVTGATGSGKSTTLAAMIDYLNSTRHRHILTLED
PIEFVHESRKALINQRQVHRDTHCFSTALRSALREDPDVIMVGELRDLETIRLALTAAETGHLVFGTLHTNSAAKTVDRL
VDVFPAGEKAMVRAMLSESLQAVVSQVLLKKVGGGRVAAHEIMLGTPAIRNLIREDKVAQLYSAIQTGGALGMKTLDMSL
KGLVGEGVVSREEAQQKARVPTDM
MDITELLAASVSRGASDLHLSAGLAPRMRVDGEVVPLDWPLLSATQVADLLSPLLNKHQQKDFETSLETDFSFELPGVAR
FRANVFQQHRGMGAVFRAIPSRVQGLETLGLGDIFRRIAELPKGLVLVTGATGSGKSTTLAAMIDYLNSTRHRHILTLED
PIEFVHESRKALINQRQVHRDTHCFSTALRSALREDPDVIMVGELRDLETIRLALTAAETGHLVFGTLHTNSAAKTVDRL
VDVFPAGEKAMVRAMLSESLQAVVSQVLLKKVGGGRVAAHEIMLGTPAIRNLIREDKVAQLYSAIQTGGALGMKTLDMSL
KGLVGEGVVSREEAQQKARVPTDM
Nucleotide
Download Length: 1035 bp
>NTDB_id=125526 HZ99_RS15535 WP_038444143.1 3471410..3472444(-) (pilT) [Pseudomonas fluorescens strain UK4]
ATGGATATCACTGAACTGCTGGCCGCAAGCGTCAGCCGGGGCGCCTCCGACCTGCATCTGTCGGCAGGGTTGGCGCCGAG
GATGAGAGTCGATGGCGAGGTTGTGCCACTCGATTGGCCATTACTGAGTGCTACGCAAGTTGCGGACTTGCTCAGCCCGC
TCCTCAATAAACACCAACAAAAGGATTTCGAAACGTCTCTTGAAACGGATTTTTCTTTCGAATTACCGGGCGTCGCGCGC
TTTCGCGCCAACGTGTTCCAGCAACACCGGGGAATGGGCGCGGTGTTTCGTGCGATTCCGTCCCGGGTCCAGGGCCTGGA
AACCCTGGGGCTGGGCGATATATTCCGGCGTATCGCCGAGCTGCCCAAGGGGCTGGTGCTGGTGACCGGCGCCACGGGGT
CGGGCAAGTCCACCACCCTGGCGGCGATGATCGATTACCTCAACAGCACCCGCCACCGGCACATCCTGACCCTTGAGGAT
CCCATCGAATTTGTCCATGAGTCGCGCAAGGCACTGATCAACCAGCGCCAGGTGCATCGCGACACCCACTGCTTCTCGAC
CGCCCTGCGCTCCGCCTTGCGCGAAGACCCGGATGTGATCATGGTGGGCGAGTTGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACGGCTGCTGAAACCGGGCACTTGGTGTTTGGCACCTTGCACACTAACTCGGCGGCGAAGACCGTGGATCGGCTG
GTGGATGTGTTTCCGGCGGGGGAGAAGGCCATGGTCCGCGCGATGCTCTCGGAGTCGCTGCAAGCGGTGGTTTCCCAGGT
CTTGCTGAAGAAAGTCGGCGGCGGGCGCGTGGCGGCCCATGAGATCATGTTGGGCACGCCGGCGATCCGTAACCTGATCC
GTGAGGATAAGGTGGCGCAGCTGTACTCGGCGATCCAGACCGGTGGGGCGTTGGGGATGAAGACCTTGGATATGAGCTTG
AAGGGGTTGGTCGGGGAAGGGGTCGTCAGCCGGGAAGAGGCGCAGCAGAAGGCGAGGGTGCCTACCGACATGTGA
ATGGATATCACTGAACTGCTGGCCGCAAGCGTCAGCCGGGGCGCCTCCGACCTGCATCTGTCGGCAGGGTTGGCGCCGAG
GATGAGAGTCGATGGCGAGGTTGTGCCACTCGATTGGCCATTACTGAGTGCTACGCAAGTTGCGGACTTGCTCAGCCCGC
TCCTCAATAAACACCAACAAAAGGATTTCGAAACGTCTCTTGAAACGGATTTTTCTTTCGAATTACCGGGCGTCGCGCGC
TTTCGCGCCAACGTGTTCCAGCAACACCGGGGAATGGGCGCGGTGTTTCGTGCGATTCCGTCCCGGGTCCAGGGCCTGGA
AACCCTGGGGCTGGGCGATATATTCCGGCGTATCGCCGAGCTGCCCAAGGGGCTGGTGCTGGTGACCGGCGCCACGGGGT
CGGGCAAGTCCACCACCCTGGCGGCGATGATCGATTACCTCAACAGCACCCGCCACCGGCACATCCTGACCCTTGAGGAT
CCCATCGAATTTGTCCATGAGTCGCGCAAGGCACTGATCAACCAGCGCCAGGTGCATCGCGACACCCACTGCTTCTCGAC
CGCCCTGCGCTCCGCCTTGCGCGAAGACCCGGATGTGATCATGGTGGGCGAGTTGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACGGCTGCTGAAACCGGGCACTTGGTGTTTGGCACCTTGCACACTAACTCGGCGGCGAAGACCGTGGATCGGCTG
GTGGATGTGTTTCCGGCGGGGGAGAAGGCCATGGTCCGCGCGATGCTCTCGGAGTCGCTGCAAGCGGTGGTTTCCCAGGT
CTTGCTGAAGAAAGTCGGCGGCGGGCGCGTGGCGGCCCATGAGATCATGTTGGGCACGCCGGCGATCCGTAACCTGATCC
GTGAGGATAAGGTGGCGCAGCTGTACTCGGCGATCCAGACCGGTGGGGCGTTGGGGATGAAGACCTTGGATATGAGCTTG
AAGGGGTTGGTCGGGGAAGGGGTCGTCAGCCGGGAAGAGGCGCAGCAGAAGGCGAGGGTGCCTACCGACATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.