Detailed information NTG0120042

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CL55_RS10360
• Genome accession: NZ_CP007501
• Coordinates: 2015613..2016311 (+)
• Length: 232 a.a.
• NCBI ID: WP_046331013.1
• Uniprot ID: -
• Organism: Polynucleobacter duraquae strain MWH-MoK4
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2010613..2021311

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CL55_RS10340 (CL55_00020480)	-	2012131..2012712 (-)	582	WP_046331009.1	DUF4390 domain-containing protein	-
CL55_RS10345 (CL55_00020490)	rsmB	2012696..2014021 (-)	1326	WP_046331010.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
CL55_RS10350 (CL55_00020500)	fmt	2014023..2015018 (-)	996	WP_046331011.1	methionyl-tRNA formyltransferase	-
CL55_RS10355 (CL55_00020510)	def	2015026..2015541 (-)	516	WP_046331012.1	peptide deformylase	-
CL55_RS10360 (CL55_00020520)	dprA	2015613..2016311 (+)	699	WP_046331013.1	DNA-processing protein DprA	Machinery gene
CL55_RS10365 (CL55_00020530)	-	2016509..2019187 (+)	2679	WP_046331014.1	DNA topoisomerase III	-
CL55_RS10820 (CL55_00020540)	-	2019247..2020248 (-)	1002	Protein_2052	FAD-dependent oxidoreductase	-

Sequence

Protein

• Length: 232 a.a.
• Molecular weight: 24911.78 Da
• Isoelectric Point: 8.6600

>NTDB_id=120042 CL55_RS10360 WP_046331013.1 2015613..2016311(+) (dprA) [Polynucleobacter duraquae strain MWH-MoK4]
MRISKNSNIVQIQRNSPDYPARLLDLYDPPSSLYIYGDIRLLNIPTIAIVGSRIASPEGVKNAHYFAQALSAEGYLIISG
LARGIDGAAHLGALGSNQDHPTIAVCGTGLDIVYPREHLGLAQAIGGVGLLVSELVPGSGPKAWHFPRRNRIIAALSLGI
LVIEAAERSGSLITARLGCELGREIFAIPGSIHNPLYRGCHQLLQQGAKLVQSPKDILEELPKWSKTEFKGV

Nucleotide

• Length: 699 bp

>NTDB_id=120042 CL55_RS10360 WP_046331013.1 2015613..2016311(+) (dprA) [Polynucleobacter duraquae strain MWH-MoK4]
ATGCGCATATCTAAAAACTCAAACATCGTCCAAATTCAACGAAATTCCCCTGACTATCCAGCTCGTCTGCTAGATTTATA
CGATCCACCCAGCTCACTCTATATATATGGTGATATTCGCCTACTAAATATTCCGACGATTGCCATCGTGGGCTCAAGAA
TTGCCAGCCCAGAAGGGGTCAAGAACGCCCACTATTTTGCGCAAGCCCTGTCAGCCGAGGGTTATCTCATTATTTCTGGG
CTGGCCCGAGGCATTGATGGGGCCGCCCATTTAGGTGCCCTTGGGTCAAATCAGGATCATCCAACCATAGCAGTATGTGG
AACAGGGCTTGATATCGTGTATCCAAGAGAACATCTTGGGTTAGCCCAGGCCATTGGTGGGGTAGGCCTCTTGGTGTCTG
AACTAGTCCCAGGATCAGGGCCAAAAGCATGGCACTTCCCTCGCAGAAACCGCATCATTGCAGCCTTGTCCCTGGGAATA
CTTGTGATAGAGGCGGCCGAGCGCTCTGGCTCGCTCATTACAGCTAGGTTGGGCTGTGAACTTGGCCGCGAGATTTTTGC
GATTCCTGGGTCAATACACAACCCACTCTATAGAGGCTGCCACCAACTACTTCAGCAAGGGGCCAAACTGGTTCAATCCC
CGAAAGACATTCTTGAGGAGCTGCCAAAATGGTCAAAAACGGAATTTAAAGGTGTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (7-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Legionella pneumophila strain ERS1305867	56.164	94.397	0.53
dprA	Vibrio cholerae strain A1552	51.152	93.534	0.478
dprA	Vibrio campbellii strain DS40M4	50.952	90.517	0.461
dprA	Neisseria gonorrhoeae MS11	50.732	88.362	0.448
dprA	Neisseria meningitidis MC58	50.732	88.362	0.448
dprA	Neisseria meningitidis strain C311	50.732	88.362	0.448
dprA	Glaesserella parasuis strain SC1401	49.048	90.517	0.444
dprA	Neisseria gonorrhoeae strain FA1090	50.244	88.362	0.444
dprA	Acinetobacter baylyi ADP1	49.519	89.655	0.444
dprA	Streptococcus mutans UA159	50	87.931	0.44
dprA	Haemophilus influenzae Rd KW20	49.275	89.224	0.44
dprA	Acinetobacter baumannii strain A118	48.571	90.517	0.44
dprA	Acinetobacter baumannii D1279779	48.571	90.517	0.44
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	49.754	87.5	0.435
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	49.754	87.5	0.435
dprA/cilB/dalA	Streptococcus pneumoniae R6	49.754	87.5	0.435
dprA/cilB/dalA	Streptococcus pneumoniae D39	49.754	87.5	0.435
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	49.754	87.5	0.435
dprA/cilB/dalA	Streptococcus mitis SK321	49.261	87.5	0.431
dprA	Lactococcus lactis subsp. cremoris KW2	49.01	87.069	0.427
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.991	99.569	0.418
dprA	Bacillus subtilis subsp. subtilis str. 168	42.273	94.828	0.401
dprA	Thermus thermophilus HB27	43.842	87.5	0.384
dprA	Latilactobacillus sakei subsp. sakei 23K	42.157	87.931	0.371