Detailed information NTG1158713

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: QOR56_RS00750
• Genome accession: NZ_OX460906
• Coordinates: 108081..108560 (+)
• Length: 159 a.a.
• NCBI ID: WP_001872860.1
• Uniprot ID: A0AB74H8K8
• Organism: Streptococcus agalactiae isolate MRI Z2-265
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 103081..113560

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR56_RS00725	-	103271..103711 (+)	441	WP_000716196.1	hypothetical protein	-
QOR56_RS10390	-	103704..104045 (+)	342	Protein_95	hypothetical protein	-
QOR56_RS00735	-	104834..105385 (+)	552	WP_000161851.1	nucleotidyltransferase family protein	-
QOR56_RS00740	-	105605..106024 (+)	420	WP_283573707.1	YjdF family protein	-
QOR56_RS00745	ltrA	106588..107865 (+)	1278	WP_001292556.1	group II intron reverse transcriptase/maturase	-
QOR56_RS00750	comX/sigX	108081..108560 (+)	480	WP_001872860.1	sigma-70 family RNA polymerase sigma factor	Regulator
QOR56_RS00755	-	108682..109374 (+)	693	WP_000049272.1	histidine phosphatase family protein	-
QOR56_RS00760	-	109371..110123 (+)	753	WP_283572024.1	M15 family metallopeptidase	-
QOR56_RS00765	-	110120..110695 (+)	576	WP_001231504.1	glucosaminidase domain-containing protein	-
QOR56_RS00770	hrcA	110838..111872 (+)	1035	WP_032459133.1	heat-inducible transcriptional repressor HrcA	-
QOR56_RS00775	grpE	111875..112447 (+)	573	WP_001865751.1	nucleotide exchange factor GrpE	-

Sequence

Protein

• Length: 159 a.a.
• Molecular weight: 19417.25 Da
• Isoelectric Point: 6.2639

>NTDB_id=1158713 QOR56_RS00750 WP_001872860.1 108081..108560(+) (comX/sigX) [Streptococcus agalactiae isolate MRI Z2-265]
MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNEGKLFIYFKTKFSNYLNDVLRHQDCQK
RQFNKMPYEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKFEKLISGERFAGKKQFIRDIQPFFNAFKAD

Nucleotide

• Length: 480 bp

>NTDB_id=1158713 QOR56_RS00750 WP_001872860.1 108081..108560(+) (comX/sigX) [Streptococcus agalactiae isolate MRI Z2-265]
TTGAGAGATTTTGAGGAGTTGTTTGATAAAGTAAAGCCAATCGTAATGAAGCTGAGAAGAAATTATTTTGTTCAACTTTG
GGAATATGATGATTGGATTCAAGAAGGGCGTATTGTACTTTTTAGGTTGCTTGAAGAACATCCGTATTTATTGGATAATG
AAGGCAAACTATTCATTTACTTTAAAACAAAATTTTCAAATTATTTAAACGATGTATTAAGACATCAAGATTGTCAAAAG
CGACAATTTAATAAAATGCCTTATGAAGAAATCAGTGAAGTTAGTCACTATGTTAAGAGTAAAGGACTAGTTTTAGATGA
CTATATTGCTTATCGTGATACCTTAACAAAAGTGGAAGAAACTTTGTCAGATATTGATAAAGAAAAATTTGAAAAACTGA
TTAGTGGTGAACGTTTCGCGGGGAAGAAACAATTCATACGAGATATTCAACCTTTTTTCAATGCTTTTAAAGCGGATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	57.325	98.742	0.566
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	52.349	93.711	0.491
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	52.349	93.711	0.491
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	52.349	93.711	0.491
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	52.349	93.711	0.491
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	52	94.34	0.491
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	52	94.34	0.491
comX/sigX	Streptococcus mutans UA159	49.677	97.484	0.484
comX	Streptococcus sobrinus strain NIDR 6715-7	43.59	98.113	0.428
comX/sigX	Streptococcus suis D9	43.226	97.484	0.421
comX/sigX	Streptococcus suis isolate S10	43.226	97.484	0.421
comX/sigX	Streptococcus suis P1/7	43.226	97.484	0.421
comX	Streptococcus thermophilus LMD-9	42.177	92.453	0.39
comX	Streptococcus thermophilus LMG 18311	42.177	92.453	0.39
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	39.869	96.226	0.384
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	39.869	96.226	0.384
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	39.869	96.226	0.384
comX/comX2	Streptococcus pneumoniae Rx1	40.397	94.969	0.384
comX/comX2	Streptococcus pneumoniae TIGR4	40.397	94.969	0.384
comX/comX1	Streptococcus pneumoniae TIGR4	40.397	94.969	0.384
comX/comX1	Streptococcus pneumoniae Rx1	40.397	94.969	0.384
comX/comX2	Streptococcus pneumoniae D39	40.397	94.969	0.384
comX/comX1	Streptococcus pneumoniae D39	40.397	94.969	0.384
comX/comX2	Streptococcus pneumoniae R6	40.397	94.969	0.384
comX/comX1	Streptococcus pneumoniae R6	40.397	94.969	0.384
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	39.216	96.226	0.377
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	39.216	96.226	0.377
comX	Streptococcus salivarius SK126	40.816	92.453	0.377
comX/sigX	Streptococcus salivarius strain HSISS4	40.816	92.453	0.377
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	38.562	96.226	0.371