Detailed information NTG1152623

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: NBW44_RS08250
• Genome accession: NZ_OW724079
• Coordinates: 1622971..1623447 (+)
• Length: 158 a.a.
• NCBI ID: WP_250307920.1
• Uniprot ID: -
• Organism: Streptococcus sp. Marseille-Q3533
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1617971..1628447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NBW44_RS08235	gap	1618500..1619510 (+)	1011	WP_250307917.1	type I glyceraldehyde-3-phosphate dehydrogenase	-
NBW44_RS08240	-	1619572..1620453 (-)	882	WP_250307918.1	RluA family pseudouridine synthase	-
NBW44_RS08245	pbp2a	1620542..1622779 (+)	2238	WP_250307919.1	penicillin-binding protein PBP2A	-
NBW44_RS08250	comR/comR2	1622971..1623447 (+)	477	WP_250307920.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 158 a.a.
• Molecular weight: 19470.57 Da
• Isoelectric Point: 8.8211

>NTDB_id=1152623 NBW44_RS08250 WP_250307920.1 1622971..1623447(+) (comR/comR2) [Streptococcus sp. Marseille-Q3533]
MLEKKYQEVKGIVHKCRKEYYLHLWEVEDWDQEGMLCLYELLEEHPELMERKDKKIYTYFKTKFRNRILDAIRKQESQKR
KLDRQVYEEVSEISHRITDGGLLLDEHYALHEMLKKYKKGLNKNDLELFERLVADERFKGRRRLLKELSILLKDFSPY

Nucleotide

• Length: 477 bp

>NTDB_id=1152623 NBW44_RS08250 WP_250307920.1 1622971..1623447(+) (comR/comR2) [Streptococcus sp. Marseille-Q3533]
ATGTTAGAGAAAAAATATCAAGAAGTAAAAGGAATTGTTCATAAATGTCGAAAAGAATATTATCTACACTTGTGGGAAGT
TGAAGATTGGGATCAAGAAGGTATGCTTTGTTTGTATGAATTGTTAGAAGAACATCCAGAGTTGATGGAAAGAAAAGATA
AAAAGATATATACCTACTTTAAAACGAAATTTAGAAATAGGATACTAGATGCAATACGAAAACAAGAGAGCCAAAAAAGA
AAATTGGATCGACAAGTTTATGAAGAAGTCAGTGAGATAAGTCACCGAATTACAGATGGAGGACTCTTGCTAGATGAACA
CTATGCCCTACACGAGATGCTAAAAAAATATAAGAAGGGTCTAAATAAAAACGATTTAGAATTATTTGAGCGATTAGTGG
CTGACGAAAGATTTAAAGGAAGGCGTCGGCTGTTAAAAGAATTAAGTATTCTATTAAAAGATTTTTCACCATATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	58.333	98.734	0.576
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	58.333	98.734	0.576
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	57.051	98.734	0.563
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	57.419	98.101	0.563
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	56.774	98.101	0.557
comX/comX2	Streptococcus pneumoniae R6	55.769	98.734	0.551
comX/comX1	Streptococcus pneumoniae R6	55.769	98.734	0.551
comX/comX1	Streptococcus pneumoniae Rx1	55.769	98.734	0.551
comX/comX2	Streptococcus pneumoniae D39	55.769	98.734	0.551
comX/comX1	Streptococcus pneumoniae D39	55.769	98.734	0.551
comX/comX2	Streptococcus pneumoniae Rx1	55.769	98.734	0.551
comX/comX2	Streptococcus pneumoniae TIGR4	55.128	98.734	0.544
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	55.128	98.734	0.544
comX/comX1	Streptococcus pneumoniae TIGR4	55.128	98.734	0.544
comX/sigX	Streptococcus mutans UA159	52	94.937	0.494
comX/sigX	Streptococcus suis isolate S10	50.649	97.468	0.494
comX/sigX	Streptococcus suis D9	50.649	97.468	0.494
comX/sigX	Streptococcus suis P1/7	50.649	97.468	0.494
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	42.384	95.57	0.405
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	42.384	95.57	0.405
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	42.384	95.57	0.405
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	42.384	95.57	0.405
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	42.384	95.57	0.405
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	42.384	95.57	0.405
comX	Streptococcus sobrinus strain NIDR 6715-7	42	94.937	0.399
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	40.127	99.367	0.399
comX	Streptococcus thermophilus LMG 18311	40.26	97.468	0.392
comX	Streptococcus thermophilus LMD-9	40.26	97.468	0.392
comX	Streptococcus salivarius SK126	40.523	96.835	0.392
comX/sigX	Streptococcus salivarius strain HSISS4	40.523	96.835	0.392