Detailed information NTG1145195

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DXE44_RS09355
• Genome accession: NZ_LT606946
• Coordinates: 1788022..1788696 (+)
• Length: 224 a.a.
• NCBI ID: WP_114654192.1
• Uniprot ID: -
• Organism: Polynucleobacter necessarius isolate PPGSP5
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1783022..1793696

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DXE44_RS09330	-	1783652..1784233 (-)	582	WP_114654188.1	DUF4390 domain-containing protein	-
DXE44_RS09335	rsmB	1784230..1785438 (-)	1209	WP_231970644.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
DXE44_RS09340	htpX	1785546..1786412 (-)	867	WP_114654189.1	zinc metalloprotease HtpX	-
DXE44_RS09345	fmt	1786405..1787427 (-)	1023	WP_114654190.1	methionyl-tRNA formyltransferase	-
DXE44_RS09350	def	1787435..1787950 (-)	516	WP_197712879.1	peptide deformylase	-
DXE44_RS09355	dprA	1788022..1788696 (+)	675	WP_114654192.1	DNA-processing protein DprA	Machinery gene
DXE44_RS09360	-	1788913..1791591 (+)	2679	WP_114654193.1	DNA topoisomerase III	-
DXE44_RS10840	mnmC	1791561..1792652 (-)	1092	Protein_1900	FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	-

Sequence

Protein

• Length: 224 a.a.
• Molecular weight: 24320.14 Da
• Isoelectric Point: 9.3555

>NTDB_id=1145195 DXE44_RS09355 WP_114654192.1 1788022..1788696(+) (dprA) [Polynucleobacter necessarius isolate PPGSP5]
MNTLKNPGITQIHQNTPCYPSRLLDLYDPPNSLYIYGDIRLLDSPMIAIVGSRNASQKGIRNARYFAQALSAEGYLIISG
LARGIDGAAHLGALGQKWDQPTIAVCGTGLDIVYPREHQKLAQAIGKSGLLASELEPGLGPKAWHFPRRNRIIAALALGI
LVIEAAERSGSLITARLGVELGREIFAIPGSIHHPLSRGCHQLLQQGAKLVQTPKDILEELKNW

Nucleotide

• Length: 675 bp

>NTDB_id=1145195 DXE44_RS09355 WP_114654192.1 1788022..1788696(+) (dprA) [Polynucleobacter necessarius isolate PPGSP5]
ATGAACACCCTAAAAAATCCAGGCATCACCCAAATTCATCAAAACACCCCTTGCTATCCTTCTCGCCTATTGGATTTGTA
CGACCCTCCCAATTCACTCTATATATATGGGGATATTCGCTTGCTGGATTCCCCGATGATTGCCATTGTTGGATCCCGCA
ACGCCAGCCAAAAGGGAATTAGAAATGCCCGCTATTTTGCTCAAGCCCTATCTGCGGAGGGCTATCTCATTATTTCGGGC
TTAGCCAGGGGTATTGATGGCGCCGCCCACTTAGGCGCCCTTGGACAGAAGTGGGACCAGCCAACCATCGCAGTATGCGG
AACAGGGCTGGACATTGTGTACCCCAGAGAGCACCAAAAATTAGCCCAAGCGATTGGTAAGAGCGGCTTACTGGCGTCTG
AATTAGAGCCAGGATTGGGGCCAAAAGCCTGGCACTTTCCACGCAGGAACCGCATTATTGCCGCCCTAGCACTAGGAATC
CTAGTAATCGAAGCAGCTGAGCGCTCTGGCTCATTGATTACAGCCAGACTAGGCGTCGAGCTTGGTCGTGAGATCTTTGC
AATTCCTGGGTCGATACATCACCCCCTGTCCAGGGGCTGTCACCAGCTACTTCAGCAAGGTGCCAAACTAGTCCAAACTC
CAAAAGATATCCTCGAAGAACTCAAAAATTGGTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (5-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Legionella pneumophila strain ERS1305867	56.731	92.857	0.527
dprA	Vibrio cholerae strain A1552	52.153	93.304	0.487
dprA	Vibrio campbellii strain DS40M4	50.725	92.411	0.469
dprA	Streptococcus mutans UA159	50.739	90.625	0.46
dprA	Lactococcus lactis subsp. cremoris KW2	50.99	90.179	0.46
dprA	Acinetobacter baumannii strain A118	49.51	91.071	0.451
dprA/cilB/dalA	Streptococcus pneumoniae D39	49.268	91.518	0.451
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	49.268	91.518	0.451
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	49.268	91.518	0.451
dprA/cilB/dalA	Streptococcus pneumoniae R6	49.268	91.518	0.451
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	49.268	91.518	0.451
dprA	Acinetobacter baumannii D1279779	49.02	91.071	0.446
dprA	Acinetobacter baylyi ADP1	48.077	92.857	0.446
dprA	Neisseria meningitidis MC58	49.505	90.179	0.446
dprA	Neisseria meningitidis strain C311	49.505	90.179	0.446
dprA	Neisseria gonorrhoeae MS11	49.505	90.179	0.446
dprA	Glaesserella parasuis strain SC1401	49.505	90.179	0.446
dprA/cilB/dalA	Streptococcus mitis SK321	48.78	91.518	0.446
dprA	Neisseria gonorrhoeae strain FA1090	49.01	90.179	0.442
dprA	Haemophilus influenzae Rd KW20	47.826	92.411	0.442
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	40.598	100	0.424
dprA	Bacillus subtilis subsp. subtilis str. 168	42.202	97.321	0.411
dprA	Thermus thermophilus HB27	43.842	90.625	0.397
dprA	Latilactobacillus sakei subsp. sakei 23K	42.718	91.964	0.393