Detailed information NTG1142294

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: DQN71_RS01675
• Genome accession: NZ_LS483471
• Coordinates: 310350..310832 (+)
• Length: 160 a.a.
• NCBI ID: WP_111694492.1
• Uniprot ID: -
• Organism: Streptococcus cristatus strain NCTC13807
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	310894..312242	310350..310832	flank	62

Gene organization within MGE regions

Location: 310350..312242

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN71_RS01675 (NCTC13807_00320)	comR/comR2	310350..310832 (+)	483	WP_111694492.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 19536.95 Da
• Isoelectric Point: 6.6076

>NTDB_id=1142294 DQN71_RS01675 WP_111694492.1 310350..310832(+) (comR/comR2) [Streptococcus cristatus strain NCTC13807]
MNFKERYEKVQWIVRRCARDYYVHLWENSDWEQEGMLIYHQLEESHPDISQDESRLYRYFKTKFRNHIHDILRKQESQKR
CFDRQSYEEVSTISHRLSQRELALDDLVALRSLLAAYTSGLNEEQLDLYHRLLGDERFKGRRSLLLELRDYLSDFSGTLL

Nucleotide

• Length: 483 bp

>NTDB_id=1142294 DQN71_RS01675 WP_111694492.1 310350..310832(+) (comR/comR2) [Streptococcus cristatus strain NCTC13807]
ATGAACTTCAAGGAACGCTATGAGAAAGTGCAGTGGATTGTTCGGCGCTGTGCACGGGATTATTATGTACATTTATGGGA
GAATAGTGATTGGGAACAAGAAGGGATGTTGATCTATCACCAGCTGGAAGAAAGCCATCCAGATATCAGTCAAGACGAAA
GTCGCCTCTATCGCTACTTCAAGACAAAATTCCGCAATCATATTCATGACATCCTTCGCAAGCAAGAGAGTCAAAAACGG
TGCTTTGATCGCCAGTCCTATGAGGAAGTCAGCACCATTAGTCATAGACTGAGTCAGCGAGAACTAGCTTTAGATGATTT
GGTTGCTCTTCGCAGCTTGCTAGCAGCCTACACCTCGGGCTTAAATGAAGAACAATTAGATCTATACCACCGCTTGTTAG
GCGACGAACGCTTCAAGGGCCGGAGAAGTCTGTTGCTCGAATTGAGGGACTACTTATCAGATTTTTCTGGGACGCTTTTA
TAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	56.604	99.375	0.563
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	56.604	99.375	0.563
comX/sigX	Streptococcus mutans UA159	48.701	96.25	0.469
comX/comX2	Streptococcus pneumoniae TIGR4	48.052	96.25	0.463
comX/comX1	Streptococcus pneumoniae TIGR4	48.052	96.25	0.463
comX/comX2	Streptococcus pneumoniae R6	47.403	96.25	0.456
comX/comX2	Streptococcus pneumoniae Rx1	47.403	96.25	0.456
comX/comX1	Streptococcus pneumoniae Rx1	47.403	96.25	0.456
comX/comX2	Streptococcus pneumoniae D39	47.403	96.25	0.456
comX/comX1	Streptococcus pneumoniae D39	47.403	96.25	0.456
comX/comX1	Streptococcus pneumoniae R6	47.403	96.25	0.456
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	46.405	95.625	0.444
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	46.405	95.625	0.444
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	46.405	95.625	0.444
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	46.405	95.625	0.444
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	43.791	95.625	0.419
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	43.791	95.625	0.419
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	43.791	95.625	0.419
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	43.791	95.625	0.419
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	43.791	95.625	0.419
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	43.791	95.625	0.419
comX	Streptococcus thermophilus LMD-9	41.667	97.5	0.406
comX	Streptococcus thermophilus LMG 18311	41.667	97.5	0.406
comX/sigX	Streptococcus suis P1/7	41.935	96.875	0.406
comX/sigX	Streptococcus suis D9	41.935	96.875	0.406
comX/sigX	Streptococcus suis isolate S10	41.935	96.875	0.406
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	41.026	97.5	0.4
comX	Streptococcus salivarius SK126	40	96.875	0.388
comX/sigX	Streptococcus salivarius strain HSISS4	40	96.875	0.388
comX	Streptococcus sobrinus strain NIDR 6715-7	38.312	96.25	0.369