Detailed information NTG1119501

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: EL071_RS04285
• Genome accession: NZ_LR134265
• Coordinates: 786771..787250 (+)
• Length: 159 a.a.
• NCBI ID: WP_164993769.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain NCTC8184
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 781771..792250

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL071_RS04245 (NCTC8184_00826)	-	782003..782200 (+)	198	WP_096405901.1	hypothetical protein	-
EL071_RS12015 (NCTC8184_00827)	-	782959..783390 (+)	432	WP_000761051.1	hypothetical protein	-
EL071_RS04260 (NCTC8184_00828)	-	783460..783663 (+)	204	WP_000840976.1	hypothetical protein	-
EL071_RS04265 (NCTC8184_00829)	-	783814..784254 (+)	441	WP_000716196.1	hypothetical protein	-
EL071_RS04270 (NCTC8184_00830)	-	784247..784591 (+)	345	WP_000073534.1	hypothetical protein	-
EL071_RS04275 (NCTC8184_00831)	-	785381..785932 (+)	552	WP_000161849.1	nucleotidyltransferase family protein	-
EL071_RS04280 (NCTC8184_00833)	-	786152..786571 (+)	420	WP_000784700.1	YjdF family protein	-
EL071_RS04285 (NCTC8184_00834)	comX/sigX	786771..787250 (+)	480	WP_164993769.1	sigma-70 family RNA polymerase sigma factor	Regulator
EL071_RS04290 (NCTC8184_00835)	-	787372..788064 (+)	693	WP_000049277.1	histidine phosphatase family protein	-
EL071_RS04295 (NCTC8184_00836)	-	788061..788813 (+)	753	WP_000739666.1	M15 family metallopeptidase	-
EL071_RS04300 (NCTC8184_00837)	-	788810..789385 (+)	576	WP_001231504.1	glucosaminidase domain-containing protein	-
EL071_RS04305 (NCTC8184_00838)	hrcA	789528..790562 (+)	1035	WP_115357055.1	heat-inducible transcriptional repressor HrcA	-
EL071_RS04310 (NCTC8184_00839)	grpE	790565..791137 (+)	573	WP_001869793.1	nucleotide exchange factor GrpE	-

Sequence

Protein

• Length: 159 a.a.
• Molecular weight: 19474.35 Da
• Isoelectric Point: 6.7304

>NTDB_id=1119501 EL071_RS04285 WP_164993769.1 786771..787250(+) (comX/sigX) [Streptococcus agalactiae strain NCTC8184]
MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQK
RQFNKMPYEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKFEKLINGERFAGKKKFIRDIQPFFNAFKAD

Nucleotide

• Length: 480 bp

>NTDB_id=1119501 EL071_RS04285 WP_164993769.1 786771..787250(+) (comX/sigX) [Streptococcus agalactiae strain NCTC8184]
TTGAGAGATTTTGAGGAGTTGTTTGATAAAGTAAAGCCAATCGTAATGAAGCTGAGAAGAAATTATTTTGTTCAACTTTG
GGAATATGATGATTGGATTCAAGAAGGACGTATTGTACTTTTTAGGTTGCTTGAAGAGCATCCGTATTTATTGGATAATG
AAAGCAAACTATTCATTTACTTTAAAACAAAATTTTCAAATTATTTAAACGATGTATTAAGACACCAAGATTGTCAAAAG
CGACAATTTAATAAAATGCCTTATGAAGAAATCAGTGAAGTTAGTCACTATGTTAAGAGTAAAGGACTAGTTTTAGATGA
CTATATTGCTTATCGTGATACTTTAACAAAAGTGGAAGAAACTTTGTCAGATATTGATAAAGAAAAATTTGAAAAACTGA
TTAATGGTGAACGTTTTGCGGGGAAGAAAAAATTCATACGAGATATTCAACCTTTTTTCAATGCTTTTAAAGCGGATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	56.688	98.742	0.56
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	52.349	93.711	0.491
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	52.349	93.711	0.491
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	52.349	93.711	0.491
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	52.349	93.711	0.491
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	52	94.34	0.491
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	52	94.34	0.491
comX/sigX	Streptococcus mutans UA159	49.677	97.484	0.484
comX	Streptococcus sobrinus strain NIDR 6715-7	43.59	98.113	0.428
comX/sigX	Streptococcus suis isolate S10	42.581	97.484	0.415
comX/sigX	Streptococcus suis P1/7	42.581	97.484	0.415
comX/sigX	Streptococcus suis D9	42.581	97.484	0.415
comX	Streptococcus thermophilus LMD-9	42.857	92.453	0.396
comX	Streptococcus thermophilus LMG 18311	42.857	92.453	0.396
comX/sigX	Streptococcus salivarius strain HSISS4	41.497	92.453	0.384
comX	Streptococcus salivarius SK126	41.497	92.453	0.384
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	39.869	96.226	0.384
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	39.869	96.226	0.384
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	39.869	96.226	0.384
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	39.216	96.226	0.377
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	39.216	96.226	0.377
comX/comX1	Streptococcus pneumoniae TIGR4	39.735	94.969	0.377
comX/comX2	Streptococcus pneumoniae Rx1	39.735	94.969	0.377
comX/comX2	Streptococcus pneumoniae D39	39.735	94.969	0.377
comX/comX1	Streptococcus pneumoniae D39	39.735	94.969	0.377
comX/comX2	Streptococcus pneumoniae R6	39.735	94.969	0.377
comX/comX1	Streptococcus pneumoniae R6	39.735	94.969	0.377
comX/comX2	Streptococcus pneumoniae TIGR4	39.735	94.969	0.377
comX/comX1	Streptococcus pneumoniae Rx1	39.735	94.969	0.377
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	38.562	96.226	0.371