Detailed information NTG1118266

Bioinformatically predicted

Overview

• Name: comX/sigX/comX2/sigX2
• Type: Regulator
• Locus tag: ELZ51_RS01905
• Genome accession: NZ_LR134094
• Coordinates: 350555..351037 (+)
• Length: 160 a.a.
• NCBI ID: WP_126427588.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	351488..351898	350555..351037	flank	451

Gene organization within MGE regions

Location: 350555..351898

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELZ51_RS01905 (NCTC4669_00404)	comX/sigX/comX2/sigX2	350555..351037 (+)	483	WP_126427588.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 19172.99 Da
• Isoelectric Point: 9.0893

>NTDB_id=1118266 ELZ51_RS01905 WP_126427588.1 350555..351037(+) (comX/sigX/comX2/sigX2) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MSLETREFFEKVKPIILKLKRHYYLQLWETDDWLQEGHLVLVRLLERHPELVGDEARLYRYFKTKFSSYLKDVLRRQESQ
KRQFDKMAYEEIGDVAHAIPAGGLWLDDYVAYREVLVQVEEALSEADRKQFQALVRGERFKGRQALLRKVRPYFSGFDQG

Nucleotide

• Length: 483 bp

>NTDB_id=1118266 ELZ51_RS01905 WP_126427588.1 350555..351037(+) (comX/sigX/comX2/sigX2) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGTCGTTAGAGACAAGGGAGTTTTTTGAGAAGGTCAAACCTATTATTTTAAAGCTGAAGCGTCATTATTACCTACAGTT
GTGGGAGACGGATGACTGGTTACAAGAGGGGCATTTGGTTTTAGTGAGGTTGTTGGAACGTCACCCAGAATTAGTAGGAG
ATGAGGCTCGCTTGTATCGGTATTTTAAAACCAAGTTTTCGTCGTATTTGAAAGATGTCTTGCGTCGGCAAGAAAGTCAG
AAACGCCAGTTTGATAAGATGGCTTATGAGGAGATAGGGGATGTGGCGCATGCGATTCCAGCTGGTGGGTTATGGTTGGA
TGATTATGTGGCTTATCGGGAGGTTTTGGTTCAGGTGGAGGAGGCCTTAAGTGAAGCGGATCGGAAGCAGTTTCAGGCTT
TGGTGAGAGGGGAACGGTTTAAGGGGCGTCAGGCTTTACTTAGGAAGGTTCGTCCTTACTTTAGTGGGTTTGACCAAGGG
TGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	74.843	99.375	0.744
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	74.843	99.375	0.744
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	74.843	99.375	0.744
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	74.843	99.375	0.744
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	74.214	99.375	0.738
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	74.214	99.375	0.738
comX/sigX	Streptococcus mutans UA159	49.007	94.375	0.463
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	48.344	94.375	0.456
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	46.405	95.625	0.444
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	45.098	95.625	0.431
comX/comX1	Streptococcus pneumoniae D39	44.737	95	0.425
comX/comX2	Streptococcus pneumoniae TIGR4	44.737	95	0.425
comX/comX1	Streptococcus pneumoniae TIGR4	44.737	95	0.425
comX/comX2	Streptococcus pneumoniae Rx1	44.737	95	0.425
comX/comX1	Streptococcus pneumoniae Rx1	44.737	95	0.425
comX/comX2	Streptococcus pneumoniae D39	44.737	95	0.425
comX/comX2	Streptococcus pneumoniae R6	44.737	95	0.425
comX/comX1	Streptococcus pneumoniae R6	44.737	95	0.425
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	43.791	95.625	0.419
comX	Streptococcus sobrinus strain NIDR 6715-7	44.371	94.375	0.419
comX	Streptococcus thermophilus LMG 18311	44	93.75	0.413
comX	Streptococcus thermophilus LMD-9	44	93.75	0.413
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	43.421	95	0.412
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	43.421	95	0.412
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	43.137	95.625	0.412
comX/sigX	Streptococcus salivarius strain HSISS4	42	93.75	0.394
comX	Streptococcus salivarius SK126	42	93.75	0.394
comX/sigX	Streptococcus suis D9	38.065	96.875	0.369
comX/sigX	Streptococcus suis isolate S10	38.065	96.875	0.369
comX/sigX	Streptococcus suis P1/7	38.065	96.875	0.369