Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | AB0R87_RS07070 | Genome accession | NZ_CP160224 |
| Coordinates | 1414361..1414639 (+) | Length | 92 a.a. |
| NCBI ID | WP_003211634.1 | Uniprot ID | A0AB34QPU8 |
| Organism | Bacillus pumilus strain JJ950 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1409361..1419639
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0R87_RS07045 (AB0R87_07045) | - | 1409455..1409730 (-) | 276 | WP_034619939.1 | hypothetical protein | - |
| AB0R87_RS07050 (AB0R87_07050) | - | 1409874..1411493 (+) | 1620 | WP_003212114.1 | ATP-binding cassette domain-containing protein | - |
| AB0R87_RS07055 (AB0R87_07055) | - | 1411532..1412764 (-) | 1233 | WP_137054688.1 | aminopeptidase | - |
| AB0R87_RS07060 (AB0R87_07060) | - | 1412871..1413002 (-) | 132 | WP_003210922.1 | protein YkpC | - |
| AB0R87_RS07065 (AB0R87_07065) | mreBH | 1413077..1414084 (-) | 1008 | WP_003211642.1 | rod-share determining protein MreBH | - |
| AB0R87_RS07070 (AB0R87_07070) | abrB | 1414361..1414639 (+) | 279 | WP_003211634.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| AB0R87_RS07075 (AB0R87_07075) | - | 1414782..1416092 (+) | 1311 | WP_113386979.1 | ATP-binding protein | - |
| AB0R87_RS07080 (AB0R87_07080) | - | 1416097..1416933 (+) | 837 | WP_366597432.1 | gamma-glutamylcyclotransferase | - |
| AB0R87_RS07085 (AB0R87_07085) | - | 1416971..1417639 (+) | 669 | WP_003211815.1 | TrkA family potassium uptake protein | - |
| AB0R87_RS07090 (AB0R87_07090) | ade | 1417903..1419633 (+) | 1731 | WP_251191322.1 | adenine deaminase | - |
Sequence
Protein
Download Length: 92 a.a. Molecular weight: 10306.01 Da Isoelectric Point: 4.6909
>NTDB_id=1019910 AB0R87_RS07070 WP_003211634.1 1414361..1414639(+) (abrB) [Bacillus pumilus strain JJ950]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSMEFFIDGEKIVLKKYKPEGVCLMTGEITSENHDYGNGQITLSAEGAE
LLLKELQEALQQ
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSMEFFIDGEKIVLKKYKPEGVCLMTGEITSENHDYGNGQITLSAEGAE
LLLKELQEALQQ
Nucleotide
Download Length: 279 bp
>NTDB_id=1019910 AB0R87_RS07070 WP_003211634.1 1414361..1414639(+) (abrB) [Bacillus pumilus strain JJ950]
TTGAAATCTATCGGAGTCGTAAGAAAAGTAGACGAACTAGGGCGTATTGTGATGCCAATCGAATTAAGAAGAGCACTTGA
TATTGCCATTAAAGACAGTATGGAATTTTTTATAGATGGGGAGAAAATCGTCTTGAAAAAATACAAGCCAGAGGGTGTTT
GCCTCATGACTGGTGAGATTACATCAGAGAACCATGATTATGGAAATGGTCAAATTACATTAAGCGCTGAAGGCGCAGAA
CTACTCTTAAAAGAGCTGCAAGAAGCTCTTCAGCAGTAA
TTGAAATCTATCGGAGTCGTAAGAAAAGTAGACGAACTAGGGCGTATTGTGATGCCAATCGAATTAAGAAGAGCACTTGA
TATTGCCATTAAAGACAGTATGGAATTTTTTATAGATGGGGAGAAAATCGTCTTGAAAAAATACAAGCCAGAGGGTGTTT
GCCTCATGACTGGTGAGATTACATCAGAGAACCATGATTATGGAAATGGTCAAATTACATTAAGCGCTGAAGGCGCAGAA
CTACTCTTAAAAGAGCTGCAAGAAGCTCTTCAGCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.522 |
100 |
0.565 |