Detailed information
Bioinformatically predicted
Overview
| Name | comR/comR2 | Type | Regulator |
| Locus tag | ABKA15_RS09275 | Genome accession | NZ_CP157941 |
| Coordinates | 1868447..1868920 (-) | Length | 157 a.a. |
| NCBI ID | WP_192208621.1 | Uniprot ID | A0A7L8W6X1 |
| Organism | Streptococcus sp. KHUD_010 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
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Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1840474..1883376 | 1868447..1868920 | within | 0 |
Gene organization within MGE regions
Location: 1840474..1883376
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABKA15_RS09070 (ABKA15_09060) | - | 1840474..1841493 (+) | 1020 | WP_192208559.1 | IS30 family transposase | - |
| ABKA15_RS09075 (ABKA15_09065) | - | 1841505..1841747 (-) | 243 | WP_049514295.1 | hypothetical protein | - |
| ABKA15_RS09080 (ABKA15_09070) | - | 1841777..1841992 (-) | 216 | WP_049514293.1 | hypothetical protein | - |
| ABKA15_RS09085 (ABKA15_09075) | - | 1842349..1844283 (+) | 1935 | WP_049514291.1 | GBS Bsp-like repeat-containing protein | - |
| ABKA15_RS09090 (ABKA15_09080) | purH | 1844342..1845889 (-) | 1548 | WP_049514289.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| ABKA15_RS09095 (ABKA15_09085) | - | 1845897..1846064 (-) | 168 | WP_350015350.1 | phosphoribosylaminoimidazolecarboxamide formyltransferase | - |
| ABKA15_RS09100 (ABKA15_09090) | purN | 1846116..1846667 (-) | 552 | WP_049514285.1 | phosphoribosylglycinamide formyltransferase | - |
| ABKA15_RS09105 (ABKA15_09095) | purM | 1846667..1847686 (-) | 1020 | WP_049514284.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
| ABKA15_RS09110 (ABKA15_09100) | purF | 1847922..1849385 (-) | 1464 | WP_049514282.1 | amidophosphoribosyltransferase | - |
| ABKA15_RS09115 (ABKA15_09105) | - | 1849476..1853201 (-) | 3726 | WP_186832633.1 | phosphoribosylformylglycinamidine synthase | - |
| ABKA15_RS09120 (ABKA15_09110) | purC | 1853248..1853955 (-) | 708 | WP_186832632.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| ABKA15_RS09125 (ABKA15_09115) | - | 1854115..1854360 (-) | 246 | WP_186832631.1 | acyl carrier protein | - |
| ABKA15_RS09130 (ABKA15_09120) | plsX | 1854357..1855355 (-) | 999 | WP_186832630.1 | phosphate acyltransferase PlsX | - |
| ABKA15_RS09135 (ABKA15_09125) | recO | 1855352..1856125 (-) | 774 | WP_186832629.1 | DNA repair protein RecO | - |
| ABKA15_RS09140 (ABKA15_09130) | - | 1856103..1857290 (-) | 1188 | WP_049533227.1 | pyridoxal phosphate-dependent aminotransferase | - |
| ABKA15_RS09145 (ABKA15_09135) | - | 1857445..1858413 (-) | 969 | WP_003027164.1 | ribose-phosphate diphosphokinase | - |
| ABKA15_RS09150 (ABKA15_09140) | - | 1858546..1859766 (-) | 1221 | WP_186832628.1 | CHAP domain-containing protein | - |
| ABKA15_RS09155 (ABKA15_09145) | mreD | 1859876..1860376 (-) | 501 | WP_106387792.1 | rod shape-determining protein MreD | - |
| ABKA15_RS09160 (ABKA15_09150) | mreC | 1860378..1861184 (-) | 807 | WP_186832627.1 | rod shape-determining protein MreC | - |
| ABKA15_RS09275 (ABKA15_09265) | comR/comR2 | 1868447..1868920 (-) | 474 | WP_192208621.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| ABKA15_RS09280 (ABKA15_09270) | ftsH | 1869125..1871095 (-) | 1971 | WP_186832585.1 | ATP-dependent zinc metalloprotease FtsH | - |
| ABKA15_RS09285 (ABKA15_09275) | hpt | 1871116..1871658 (-) | 543 | WP_049512741.1 | hypoxanthine phosphoribosyltransferase | - |
| ABKA15_RS09290 (ABKA15_09280) | tilS | 1871664..1872941 (-) | 1278 | WP_049512740.1 | tRNA lysidine(34) synthetase TilS | - |
| ABKA15_RS09295 (ABKA15_09285) | - | 1872938..1874218 (-) | 1281 | WP_049512737.1 | serine hydrolase | - |
| ABKA15_RS09300 (ABKA15_09290) | - | 1874211..1874339 (-) | 129 | WP_152907026.1 | SP_0009 family protein | - |
| ABKA15_RS09305 (ABKA15_09295) | - | 1874342..1874710 (-) | 369 | WP_003026832.1 | septum formation initiator family protein | - |
| ABKA15_RS09310 (ABKA15_09300) | - | 1874703..1874969 (-) | 267 | WP_049512735.1 | RNA-binding S4 domain-containing protein | - |
| ABKA15_RS09315 (ABKA15_09305) | mfd | 1875049..1878555 (-) | 3507 | WP_152907025.1 | transcription-repair coupling factor | - |
| ABKA15_RS09320 (ABKA15_09310) | pth | 1878548..1879117 (-) | 570 | WP_003032454.1 | aminoacyl-tRNA hydrolase | - |
| ABKA15_RS09325 (ABKA15_09315) | ychF | 1879190..1880305 (-) | 1116 | WP_049512731.1 | redox-regulated ATPase YchF | - |
| ABKA15_RS09330 (ABKA15_09320) | - | 1880451..1880951 (+) | 501 | WP_049512729.1 | YehR family protein | - |
| ABKA15_RS09335 (ABKA15_09325) | - | 1880975..1881172 (-) | 198 | WP_049512728.1 | DUF951 family protein | - |
| ABKA15_RS09340 (ABKA15_09330) | dnaN | 1881172..1882308 (-) | 1137 | WP_049512726.1 | DNA polymerase III subunit beta | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 19253.09 Da Isoelectric Point: 7.9719
>NTDB_id=1009145 ABKA15_RS09275 WP_192208621.1 1868447..1868920(-) (comR/comR2) [Streptococcus sp. KHUD_010]
MEFKELYGKVRGIVLKCRREYYVHLWELSDWDQEGMLVLYQLVSRYPQLVETESQLYVYYKTKFRNHILDILRKQESQKR
KLDRQAYEEVSEIGHKLSLKELYLDELVILRDQLKSYQAQLSPEKQEQYERLLADERFKGRQAMIRELRAYLKDYSD
MEFKELYGKVRGIVLKCRREYYVHLWELSDWDQEGMLVLYQLVSRYPQLVETESQLYVYYKTKFRNHILDILRKQESQKR
KLDRQAYEEVSEIGHKLSLKELYLDELVILRDQLKSYQAQLSPEKQEQYERLLADERFKGRQAMIRELRAYLKDYSD
Nucleotide
Download Length: 474 bp
>NTDB_id=1009145 ABKA15_RS09275 WP_192208621.1 1868447..1868920(-) (comR/comR2) [Streptococcus sp. KHUD_010]
ATGGAGTTCAAGGAGTTGTATGGGAAGGTAAGGGGGATTGTATTAAAGTGCCGTCGGGAATATTATGTCCACCTGTGGGA
ATTAAGCGATTGGGACCAAGAGGGCATGTTAGTACTCTATCAGTTGGTAAGTCGCTATCCGCAGCTGGTAGAGACAGAAA
GTCAGCTCTATGTTTACTATAAGACCAAGTTCCGCAATCATATCCTGGACATCCTCCGTAAACAGGAAAGCCAAAAACGC
AAACTCGATCGTCAAGCTTATGAAGAAGTGAGCGAGATAGGTCACAAGCTCAGCCTGAAAGAGTTGTATCTGGATGAATT
GGTGATTCTCCGAGACCAGCTAAAGAGCTATCAAGCTCAACTGAGTCCAGAGAAACAAGAGCAGTACGAGCGCTTACTAG
CTGATGAACGTTTCAAAGGCCGCCAAGCCATGATTCGAGAATTAAGAGCCTACTTAAAGGACTATAGCGATTAA
ATGGAGTTCAAGGAGTTGTATGGGAAGGTAAGGGGGATTGTATTAAAGTGCCGTCGGGAATATTATGTCCACCTGTGGGA
ATTAAGCGATTGGGACCAAGAGGGCATGTTAGTACTCTATCAGTTGGTAAGTCGCTATCCGCAGCTGGTAGAGACAGAAA
GTCAGCTCTATGTTTACTATAAGACCAAGTTCCGCAATCATATCCTGGACATCCTCCGTAAACAGGAAAGCCAAAAACGC
AAACTCGATCGTCAAGCTTATGAAGAAGTGAGCGAGATAGGTCACAAGCTCAGCCTGAAAGAGTTGTATCTGGATGAATT
GGTGATTCTCCGAGACCAGCTAAAGAGCTATCAAGCTCAACTGAGTCCAGAGAAACAAGAGCAGTACGAGCGCTTACTAG
CTGATGAACGTTTCAAAGGCCGCCAAGCCATGATTCGAGAATTAAGAGCCTACTTAAAGGACTATAGCGATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.