Detailed information NTG1009139

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: ABKA15_RS07990
• Genome accession: NZ_CP157941
• Coordinates: 1628181..1628654 (-)
• Length: 157 a.a.
• NCBI ID: WP_049514563.1
• Uniprot ID: A0AAU7PXJ7
• Organism: Streptococcus sp. KHUD_010
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	1628889..1629425	1628181..1628654	flank	235

Gene organization within MGE regions

Location: 1628181..1629425

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABKA15_RS07990 (ABKA15_07980)	comR/comR2	1628181..1628654 (-)	474	WP_049514563.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 19209.08 Da
• Isoelectric Point: 8.6112

>NTDB_id=1009139 ABKA15_RS07990 WP_049514563.1 1628181..1628654(-) (comR/comR2) [Streptococcus sp. KHUD_010]
MEFKELYGKVRGIVLKCRREYYVHLWELSDWDQEGMLVLYQLVSRYPQLVETESQLYVYYKTKFRNHILDILRKQESQKR
KLDRQAYEEVSEIGHKLSLKELYLDELVILRDQLKSYQAQLSPEKQEQYERLLADERFKGRQAMIRELRAYLKDYSA

Nucleotide

• Length: 474 bp

>NTDB_id=1009139 ABKA15_RS07990 WP_049514563.1 1628181..1628654(-) (comR/comR2) [Streptococcus sp. KHUD_010]
ATGGAGTTCAAGGAGTTGTATGGGAAGGTAAGGGGGATTGTATTAAAGTGCCGTCGGGAATATTATGTCCACCTGTGGGA
ATTAAGCGATTGGGACCAAGAGGGCATGTTAGTACTCTATCAGTTGGTAAGTCGCTATCCGCAGCTGGTAGAGACAGAAA
GTCAGCTCTATGTTTACTATAAGACCAAGTTCCGCAATCATATCCTGGACATCCTCCGTAAACAGGAAAGCCAAAAACGC
AAACTCGATCGTCAAGCTTATGAAGAAGTGAGCGAGATTGGTCACAAGCTCAGCCTGAAAGAGTTGTATCTGGATGAATT
GGTGATTCTCCGAGACCAGCTAAAGAGCTATCAAGCTCAACTGAGTCCAGAGAAACAAGAGCAGTACGAGCGCTTACTAG
CTGATGAACGTTTCAAAGGCCGCCAAGCCATGATTCGAGAATTAAGAGCCTACTTAAAGGACTATAGCGCTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	59.873	100	0.599
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	59.873	100	0.599
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	55.195	98.089	0.541
comX/comX2	Streptococcus pneumoniae D39	54.545	98.089	0.535
comX/comX1	Streptococcus pneumoniae D39	54.545	98.089	0.535
comX/comX1	Streptococcus pneumoniae R6	54.545	98.089	0.535
comX/comX2	Streptococcus pneumoniae R6	54.545	98.089	0.535
comX/comX2	Streptococcus pneumoniae Rx1	54.545	98.089	0.535
comX/comX1	Streptococcus pneumoniae Rx1	54.545	98.089	0.535
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	54.545	98.089	0.535
comX/comX2	Streptococcus pneumoniae TIGR4	53.896	98.089	0.529
comX/comX1	Streptococcus pneumoniae TIGR4	53.896	98.089	0.529
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	53.896	98.089	0.529
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	53.247	98.089	0.522
comX/sigX	Streptococcus mutans UA159	49.351	98.089	0.484
comX/sigX	Streptococcus suis D9	47.097	98.726	0.465
comX/sigX	Streptococcus suis isolate S10	47.097	98.726	0.465
comX/sigX	Streptococcus suis P1/7	47.097	98.726	0.465
comX	Streptococcus salivarius SK126	43.871	98.726	0.433
comX/sigX	Streptococcus salivarius strain HSISS4	43.226	98.726	0.427
comX	Streptococcus thermophilus LMG 18311	43.226	98.726	0.427
comX	Streptococcus thermophilus LMD-9	43.226	98.726	0.427
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	42.308	99.363	0.42
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	42.308	99.363	0.42
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	42.308	99.363	0.42
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	42.308	99.363	0.42
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	42.308	99.363	0.42
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	42.308	99.363	0.42
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	38.462	99.363	0.382
comX	Streptococcus sobrinus strain NIDR 6715-7	38.961	98.089	0.382