Escherichia coli O78 strain 31

TA loci of Escherichia coli O78 strain 3

Number of TA loci: experimental0; insolico30

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA218053 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS01620 (hicA) LCF29_RS01625 (hicB) hicAB/-
in_silico TA218054 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS01870 (ataT) LCF29_RS01865 (ataR) ataRT/DUF1778(antitoxin)
in_silico TA218055 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS02075 (ataT) LCF29_RS02080 (ataR) ataRT/DUF1778(antitoxin)
in_silico TA218056 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS03395 (yhaV) LCF29_RS03400 (prlF) prlF-yhaV (relBE)/YhaV-PrlF
in_silico TA218058 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS05215 (chpB) LCF29_RS05210 (chpS) chpSB/PRK09812-ChpS
in_silico TA218059 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS05760 (shpA) LCF29_RS05765 (shpB) shpAB/BrnT-BrnA
in_silico TA218060 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS06290 (ccdB) LCF29_RS06285 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA218061 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS07320 (yafQ) LCF29_RS07325 (dinJ) DinJ-YafQ (relBE)/YafQ-RelB
in_silico TA218062 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS08360 (Hha) LCF29_RS08365 (TomB) Hha-TomB/-
in_silico TA218067 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS13970 (hicA) LCF29_RS13975 (hicB) hicAB/UPF0150(antitoxin)
in_silico TA218068 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS14345 (hipA) LCF29_RS14350 (hipB) hipBA/HipA-HipB
in_silico TA218069 Prophage Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS14605 (relE) LCF29_RS14610 (relB) relBE/ParE-RelB
in_silico TA218079 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS17375 (yoeB) LCF29_RS17380 (yefM) yefM-yoeB (relBE)/YoeB-YefM
in_silico TA218080 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS19565 (vapC) LCF29_RS19570 (vapB) vapBC/VapC-VagC
in_silico TA218081 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS21020 (mazF) LCF29_RS21025 (mazE) mazEF/PRK09907-MazE
in_silico TA218085 - Escherichia coli O78 strain 3 (chromosome) NZ_CP084096 LCF29_RS23960 (higB) LCF29_RS23955 (higA) higBA (relBE)/HTH(antitoxin)
in_silico TA218089 Plasmid Escherichia coli O78 strain 3 (plasmid unnamed) NZ_CP084097 LCF29_RS25430 (parE) LCF29_RS25435 (parD) parDE/RelE-RHH
in_silico TA218090 Plasmid Escherichia coli O78 strain 3 (plasmid unnamed) NZ_CP084097 LCF29_RS25505 (vagD) LCF29_RS25500 (vagC) vagCD/VapC-VagC
in_silico TA218091 Plasmid Escherichia coli O78 strain 3 (plasmid unnamed) NZ_CP084097 LCF29_RS25535 (relE) LCF29_RS25540 (relB) relBE/ParE-YafN
in_silico TA218096 Plasmid Escherichia coli O78 strain 3 (plasmid unnamed) NZ_CP084097 LCF29_RS25610 (vapC) LCF29_RS25605 (vapB) vapBC/VapC-VagC
experimentalExperimentally validated     insolicoBioinformatically predicted