Escherichia coli PCN033
Experimental investigation has been performed.
Bioinformatics investigation has been performed| T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
|---|---|---|---|---|---|
| T6SS01034 | i1 | Escherichia coli PCN033 | chromosome (NZ_CP006632) | 246100..267921 | anti-bacterial; anti-eukaryotic; anti-adverse environment |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Regulator ID | Locus tag (Gene) | Related T6SS | Regulator type | Regulatory pathway | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID | Target (Regulation) |
|---|---|---|---|---|---|---|---|---|---|
| REG0357 |
PPECC33_RS11180 (BaeS) | T6SS01034 |
protein | TCS-HK | Escherichia coli PCN033 | chromosome (NZ_CP006632) | 2271464..2272867 (+) | 446597798 | PPECC33_RS11185 (BaeR) (↓) |
| REG0358 |
PPECC33_RS11185 (BaeR) | T6SS01034 |
protein | TCS-RR | Escherichia coli PCN033 | chromosome (NZ_CP006632) | 2272864..2273586 (+) | 446060022 | T6SS promotor (↓) |
| REG0362 |
PPECC33_RS11945 (rcsB) | T6SS01034 |
protein | TCS-RR | Escherichia coli PCN033 | chromosome (NZ_CP006632) | 2429320..2429970 (+) | 446984661 | T6SS transcription (↓) |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Effector ID | Locus tag (Gene) | Classification | Cognate immunity protein | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID |
|---|---|---|---|---|---|---|---|---|
| EFF28262 |
PPECC33_RS01260 (Rhs1) | - | - | T6SS01034 |
Escherichia coli PCN033 | chromosome (NZ_CP006632) | 270305..274567 (+) | WP_047938332.1 |
| EFF28264 |
PPECC33_RS03580 (Rhs3) | - | IMU38222 |
T6SS01034 |
Escherichia coli PCN033 | chromosome (NZ_CP006632) | 774741..778916 (+) | WP_047938335.1 |
| EFF28267 |
PPECC33_RS07930 (Rhs2) | - | IMU38223 |
T6SS01034 |
Escherichia coli PCN033 | chromosome (NZ_CP006632) | 1615760..1619914 (+) | WP_047938343.1 |
| EFF28269 |
PPECC33_RS10745 (Rhs4) | - | - | T6SS01034 |
Escherichia coli PCN033 | chromosome (NZ_CP006632) | 2169467..2173648 (-) | WP_047938391.1 |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
|---|---|---|---|---|---|---|---|
| IMU38222 |
PPECC33_RS03585 (Rhs3I) | T6SS01034 |
Escherichia coli PCN033 | chromosome (NZ_CP006632) | 778901..779275 (+) | WP_000494464.1 | EFF28269 |
| IMU38223 |
PPECC33_RS07935 (Rhs2I) | T6SS01034 |
Escherichia coli PCN033 | chromosome (NZ_CP006632) | 1619941..1620285 (+) | WP_001279013.1 | EFF28269 |
Experimental investigation has been performed. Bioinformatics investigation has been performed| ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
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Experimental investigation has been performed. Bioinformatics investigation has been performed| Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
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