Detailed information of regulator
|Regulatory pathway (from literatures)||TCS-RR|
|KEGG pathway (determined by BlastKOALA)||Two-component system (map02020)|
|Related T6SS||T6SS01034 (Type i1)|
|Strain||Escherichia coli PCN033|
|Sequence||Protein sequence (241 a.a.); Nucleotide sequence (723 bp)|
|Description||EMSA assays indicated that phosphorylated BaeR (BaeR-P) directly bound to promoter DNA region 1 of PCN033. A 294 bp fragment in the T6SS gene cluster was used for DNase I foot-printing assay. BaeR induced the expression of T6SS under zinc attack, which in turn directly contributed to bacteria zinc tolerance.|
External database links
|Target||Regulation (↓/↑)||Target sequence|
Pfam domain hit(s) of regulator
|Domain||Pfam ID||E-value||Aligned region|
- Transmembrane helices are predicted using TMHMM 2.0 software.
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
|Prediction||Probability||Cleavage site||Signal peptide sequence|
Protein sequence of regulator: 241 a.a. .
Nucleotide sequence of regulator: 723 bp .