Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   SOZ35_RS02030 Genome accession   NZ_CP150480
Coordinates   405212..405352 (+) Length   46 a.a.
NCBI ID   WP_223251813.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain TL401     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 400212..410352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOZ35_RS02025 (SOZ35_02025) - 402079..405171 (+) 3093 Protein_365 amino acid adenylation domain-containing protein -
  SOZ35_RS02030 (SOZ35_02030) comS 405212..405352 (+) 141 WP_223251813.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5368.32 Da        Isoelectric Point: 10.0132

>NTDB_id=970453 SOZ35_RS02030 WP_223251813.1 405212..405352(+) (comS) [Bacillus atrophaeus strain TL401]
MNRYSKRLIKSIILYPRPSEGCISSISLDKQAQATTSLLYFCWKEK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=970453 SOZ35_RS02030 WP_223251813.1 405212..405352(+) (comS) [Bacillus atrophaeus strain TL401]
TTGAACCGATACAGCAAGCGCCTTATCAAGAGCATTATCCTGTATCCTCGGCCCAGCGAAGGATGTATATCCTCAATCAG
CTTGGACAAACAAGCACAAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

80.435

100

0.804

Multiple sequence alignment