Detailed information NTG0970454

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: SOZ35_RS02205
• Genome accession: NZ_CP150480
• Coordinates: 448558..449706 (+)
• Length: 382 a.a.
• NCBI ID: WP_004430265.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain TL401
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 443558..454706

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOZ35_RS02185 (SOZ35_02185)	-	443881..444561 (-)	681	WP_340640200.1	ABC transporter ATP-binding protein	-
SOZ35_RS02190 (SOZ35_02190)	-	444579..446057 (-)	1479	WP_340640201.1	ABC transporter permease	-
SOZ35_RS02195 (SOZ35_02195)	-	446272..446958 (+)	687	WP_106045683.1	response regulator transcription factor	-
SOZ35_RS02200 (SOZ35_02200)	-	446945..448363 (+)	1419	WP_106360808.1	HAMP domain-containing sensor histidine kinase	-
SOZ35_RS02205 (SOZ35_02205)	rapC	448558..449706 (+)	1149	WP_004430265.1	tetratricopeptide repeat protein	Regulator
SOZ35_RS02210 (SOZ35_02210)	phrC	449690..449809 (+)	120	WP_004430266.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
SOZ35_RS02215 (SOZ35_02215)	-	449943..450050 (-)	108	WP_072053240.1	YjcZ family sporulation protein	-
SOZ35_RS02220 (SOZ35_02220)	-	450254..450361 (-)	108	WP_035192051.1	YjcZ family sporulation protein	-
SOZ35_RS02225 (SOZ35_02225)	-	450468..451832 (-)	1365	WP_277714329.1	aspartate kinase	-
SOZ35_RS02230 (SOZ35_02230)	ceuB	452265..453215 (+)	951	WP_010789705.1	ABC transporter permease	Machinery gene
SOZ35_RS02235 (SOZ35_02235)	-	453208..454155 (+)	948	WP_340640202.1	iron chelate uptake ABC transporter family permease subunit	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45756.03 Da
• Isoelectric Point: 4.8173

>NTDB_id=970454 SOZ35_RS02205 WP_004430265.1 448558..449706(+) (rapC) [Bacillus atrophaeus strain TL401]
MKSEVIPSSAVGQKINEWYKYIRTFSVPDAEILKAEIEREIEHMEDDPNLLLYFSLMEFRHQLMLDYLEPLEKLKIEDQP
SLSELLRNIDSNQADLKGLLDYYVNFFRGMHEFDKREFISAITYYKQAEKRLSFVADHIERAEFYFKVAEAYYYMKQTYF
SLIHIKNAYEIYAEQETYNVRIIQCHFVFGVNLMDERRFEQAARHFELALHMAESENKAQLVGRALYNIGLCYYNQDLLE
PAIDYFERAVSIFESNAIIKSLPQAYFLITQIYYKCKNNSKAVEYHSRGYEYAKETDDIDYMVKFEFLKTLYQAQPDEQG
IEKCFYYLKNKNMYADIEDLALVVAKYYYEQKNFEMSSSYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=970454 SOZ35_RS02205 WP_004430265.1 448558..449706(+) (rapC) [Bacillus atrophaeus strain TL401]
ATGAAGAGCGAGGTGATTCCTTCTTCAGCAGTCGGTCAAAAAATTAACGAGTGGTATAAGTATATTCGTACGTTCAGTGT
ACCGGACGCCGAAATTCTAAAAGCCGAGATTGAACGGGAAATTGAACATATGGAAGACGATCCGAACTTGCTGCTATATT
TCTCATTAATGGAATTCCGCCACCAGCTGATGCTTGATTATCTTGAGCCGTTAGAAAAATTAAAAATAGAGGACCAGCCG
AGCTTGTCAGAATTACTGCGCAACATTGACAGCAATCAGGCTGATTTAAAAGGGCTGCTTGATTATTATGTAAACTTTTT
TCGGGGGATGCACGAATTTGATAAGAGAGAATTCATTTCAGCCATCACTTATTACAAACAGGCTGAAAAAAGACTTTCCT
TTGTAGCGGATCATATTGAAAGAGCCGAGTTCTATTTTAAAGTGGCCGAAGCTTATTACTACATGAAACAGACGTATTTC
TCACTGATCCATATCAAAAATGCCTACGAAATATATGCCGAGCAAGAAACATATAATGTTAGAATTATCCAGTGTCATTT
TGTTTTCGGAGTAAATTTGATGGATGAAAGGCGTTTCGAACAAGCCGCGCGCCATTTTGAACTCGCATTACATATGGCGG
AATCAGAAAATAAAGCACAATTGGTCGGAAGAGCGCTTTATAATATTGGGTTGTGTTATTACAACCAAGATCTTCTTGAG
CCTGCCATTGACTATTTTGAAAGAGCGGTTTCTATATTCGAAAGCAACGCCATCATTAAATCTCTTCCTCAGGCATATTT
TCTGATCACGCAGATTTATTATAAATGTAAAAATAATTCTAAAGCAGTGGAATATCACAGCAGGGGTTATGAATATGCTA
AAGAAACAGATGATATTGACTACATGGTGAAATTTGAATTTTTAAAAACTCTATATCAAGCCCAGCCGGATGAACAAGGA
ATCGAAAAATGCTTTTATTACCTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCACTAGTAGTAGCTAAATA
TTACTATGAACAAAAAAACTTCGAAATGTCATCTTCCTACTTTCTCAAAGTAGAAGAGGCCAGAAAACAAATACAAAGGA
GTGAAGGTTTATATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_1) (224-256)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	85.079	100	0.851
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571