Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   SOZ35_RS02230 Genome accession   NZ_CP150480
Coordinates   452265..453215 (+) Length   316 a.a.
NCBI ID   WP_010789705.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain TL401     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 447265..458215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOZ35_RS02205 (SOZ35_02205) rapC 448558..449706 (+) 1149 WP_004430265.1 tetratricopeptide repeat protein Regulator
  SOZ35_RS02210 (SOZ35_02210) phrC 449690..449809 (+) 120 WP_004430266.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  SOZ35_RS02215 (SOZ35_02215) - 449943..450050 (-) 108 WP_072053240.1 YjcZ family sporulation protein -
  SOZ35_RS02220 (SOZ35_02220) - 450254..450361 (-) 108 WP_035192051.1 YjcZ family sporulation protein -
  SOZ35_RS02225 (SOZ35_02225) - 450468..451832 (-) 1365 WP_277714329.1 aspartate kinase -
  SOZ35_RS02230 (SOZ35_02230) ceuB 452265..453215 (+) 951 WP_010789705.1 ABC transporter permease Machinery gene
  SOZ35_RS02235 (SOZ35_02235) - 453208..454155 (+) 948 WP_340640202.1 iron chelate uptake ABC transporter family permease subunit -
  SOZ35_RS02240 (SOZ35_02240) yclP 454149..454907 (+) 759 WP_004430271.1 petrobactin ABC transporter ATP-binding protein YclP -
  SOZ35_RS02245 (SOZ35_02245) - 454929..455882 (+) 954 WP_061669572.1 siderophore ABC transporter substrate-binding protein -
  SOZ35_RS02250 (SOZ35_02250) - 456173..457591 (-) 1419 WP_010789702.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34967.50 Da        Isoelectric Point: 9.8731

>NTDB_id=970456 SOZ35_RS02230 WP_010789705.1 452265..453215(+) (ceuB) [Bacillus atrophaeus strain TL401]
MKLRYLVVLLILLAFCSIFIGVEDLSPLDLFHMNKEEASTLFASRLPRLISIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLIKMLIAFIFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNISSWLQGDFSLIVKGRYELLFLSIPLVIIAYVFADKFTVAGMGESFSVNLGLKYKRIVNIGLIISSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLLCDILGRIIIFPYEISIGLMVGIIGSGIFLYMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=970456 SOZ35_RS02230 WP_010789705.1 452265..453215(+) (ceuB) [Bacillus atrophaeus strain TL401]
ATGAAGCTACGTTACTTAGTTGTTTTACTTATTTTACTTGCATTCTGTTCTATTTTTATCGGCGTAGAGGATCTGTCGCC
GCTGGATCTTTTTCATATGAATAAAGAAGAGGCTTCAACGCTTTTCGCCAGCCGTTTACCGAGATTAATCAGCATTATTA
TTGCAGGCATGAGCCTGAGCATCTGCGGTTTAATTATGCAGCAGATCAGCCGGAATAAATTCGTTTCGCCGACAACTGCC
GGCACGATGGATTGGGCGAGGCTCGGGATTTTGATTTCATTAATGCTGTTTACCTCTGCCAGTCCGCTGATAAAAATGCT
GATTGCTTTTATATTTGCGCTTGCGGGCAACTTCCTGTTCATGAAAATTCTTGAGAGAATAAAGTTTAATGATACGATCT
TTATTCCTCTCGTGGGCTTAATGCTTGGGAACATTGTCAGCTCGATTGCGACGTTTATCGCGTATAAATATGATTTAATC
CAAAATATTTCTTCATGGCTTCAAGGAGACTTCTCTCTCATTGTGAAAGGGAGATATGAACTTTTATTCTTGAGTATCCC
GCTTGTGATAATCGCATATGTATTTGCTGACAAATTCACAGTAGCAGGGATGGGGGAAAGCTTCTCCGTCAACCTTGGCC
TGAAATATAAACGGATTGTGAATATCGGGCTGATTATATCGTCGCTGATCACGTCCCTCGTGATTTTGACTGTCGGTATG
CTGCCGTTCCTTGGGCTAATCATTCCGAATATCGTATCCATTTACAGGGGAGACAACCTGAAAAGCAGCCTGCCCCACAC
AGCTCTTTTAGGTGCCGTTTTTGTGCTGCTTTGCGATATATTGGGCAGGATTATCATTTTTCCGTACGAAATCTCGATTG
GCTTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTATATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment