Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   SOZ35_RS02210 Genome accession   NZ_CP150480
Coordinates   449690..449809 (+) Length   39 a.a.
NCBI ID   WP_004430266.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain TL401     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 444690..454809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOZ35_RS02195 (SOZ35_02195) - 446272..446958 (+) 687 WP_106045683.1 response regulator transcription factor -
  SOZ35_RS02200 (SOZ35_02200) - 446945..448363 (+) 1419 WP_106360808.1 HAMP domain-containing sensor histidine kinase -
  SOZ35_RS02205 (SOZ35_02205) rapC 448558..449706 (+) 1149 WP_004430265.1 tetratricopeptide repeat protein Regulator
  SOZ35_RS02210 (SOZ35_02210) phrC 449690..449809 (+) 120 WP_004430266.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  SOZ35_RS02215 (SOZ35_02215) - 449943..450050 (-) 108 WP_072053240.1 YjcZ family sporulation protein -
  SOZ35_RS02220 (SOZ35_02220) - 450254..450361 (-) 108 WP_035192051.1 YjcZ family sporulation protein -
  SOZ35_RS02225 (SOZ35_02225) - 450468..451832 (-) 1365 WP_277714329.1 aspartate kinase -
  SOZ35_RS02230 (SOZ35_02230) ceuB 452265..453215 (+) 951 WP_010789705.1 ABC transporter permease Machinery gene
  SOZ35_RS02235 (SOZ35_02235) - 453208..454155 (+) 948 WP_340640202.1 iron chelate uptake ABC transporter family permease subunit -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4111.89 Da        Isoelectric Point: 7.9858

>NTDB_id=970455 SOZ35_RS02210 WP_004430266.1 449690..449809(+) (phrC) [Bacillus atrophaeus strain TL401]
MKLKSKLLIICLAAAAVFATVGVSNAEAPDYQVTERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=970455 SOZ35_RS02210 WP_004430266.1 449690..449809(+) (phrC) [Bacillus atrophaeus strain TL401]
ATGAAATTGAAATCTAAATTGCTCATTATTTGTTTGGCTGCAGCTGCTGTGTTTGCAACAGTTGGAGTGTCCAATGCTGA
AGCGCCTGATTATCAGGTGACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

75

100

0.769

Multiple sequence alignment