Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | VO226_RS15795 | Genome accession | NZ_CP142770 |
| Coordinates | 3387845..3388879 (-) | Length | 344 a.a. |
| NCBI ID | WP_328716753.1 | Uniprot ID | - |
| Organism | Halomonas elongata strain SEK2 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3382845..3393879
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VO226_RS15785 (VO226_15785) | tyrS | 3385395..3386594 (-) | 1200 | WP_193345084.1 | tyrosine--tRNA ligase | - |
| VO226_RS15790 (VO226_15790) | - | 3386706..3387836 (+) | 1131 | WP_328716752.1 | anhydro-N-acetylmuramic acid kinase | - |
| VO226_RS15795 (VO226_15795) | pilT | 3387845..3388879 (-) | 1035 | WP_328716753.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| VO226_RS15800 (VO226_15800) | - | 3388936..3389640 (+) | 705 | WP_328716754.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| VO226_RS15805 (VO226_15805) | proC | 3389701..3390525 (+) | 825 | WP_013333869.1 | pyrroline-5-carboxylate reductase | - |
| VO226_RS15810 (VO226_15810) | - | 3390552..3391145 (+) | 594 | WP_013333870.1 | YggT family protein | - |
| VO226_RS15815 (VO226_15815) | metX | 3391188..3392345 (+) | 1158 | WP_013333871.1 | homoserine O-succinyltransferase MetX | - |
| VO226_RS15820 (VO226_15820) | metW | 3392345..3392971 (+) | 627 | WP_041602709.1 | methionine biosynthesis protein MetW | - |
| VO226_RS15825 (VO226_15825) | sfsA | 3392978..3393709 (-) | 732 | WP_013333873.1 | DNA/RNA nuclease SfsA | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 36699.23 Da Isoelectric Point: 6.3473
>NTDB_id=926709 VO226_RS15795 WP_328716753.1 3387845..3388879(-) (pilT) [Halomonas elongata strain SEK2]
MNITELLAASAKRGASDLHLSAGMAPMMRVDGELEALDGPPVDDPTLRRELRRLLGESHWATFESELEVDVALELPGVAR
FRGNVFQHGRGIGAVFRTIPGDVPGLAALGMADTLGALAELRRGLVLVTGPTGSGKSTTLAALVDVINETRREHILTIED
PVEFVHHGKRCLVSQREVSRDTRSFAAALRGALREDPDVIMVGEMRDLETMRLALTAAETGHLVLGTLHTLSAAKTIDRI
IDAFPGPEQGMVRAMLSESLQAVVSQVLLKRCGGGRVAAHEVMVATPAVRNLIREDKVAQLHSVLQTGAAQGMQTLDAAL
ARLVAEGVVAPDEAQSRARAPLGR
MNITELLAASAKRGASDLHLSAGMAPMMRVDGELEALDGPPVDDPTLRRELRRLLGESHWATFESELEVDVALELPGVAR
FRGNVFQHGRGIGAVFRTIPGDVPGLAALGMADTLGALAELRRGLVLVTGPTGSGKSTTLAALVDVINETRREHILTIED
PVEFVHHGKRCLVSQREVSRDTRSFAAALRGALREDPDVIMVGEMRDLETMRLALTAAETGHLVLGTLHTLSAAKTIDRI
IDAFPGPEQGMVRAMLSESLQAVVSQVLLKRCGGGRVAAHEVMVATPAVRNLIREDKVAQLHSVLQTGAAQGMQTLDAAL
ARLVAEGVVAPDEAQSRARAPLGR
Nucleotide
Download Length: 1035 bp
>NTDB_id=926709 VO226_RS15795 WP_328716753.1 3387845..3388879(-) (pilT) [Halomonas elongata strain SEK2]
ATGAATATTACCGAACTGCTGGCAGCCTCGGCAAAGCGGGGCGCCTCCGATCTGCATCTGTCGGCAGGCATGGCACCGAT
GATGCGCGTCGACGGCGAGCTGGAAGCGCTCGATGGGCCGCCCGTCGATGACCCGACCTTGCGCAGAGAACTTCGAAGAC
TGCTCGGTGAGTCGCATTGGGCAACCTTCGAGTCCGAGCTGGAAGTCGACGTTGCCCTGGAGCTTCCCGGAGTGGCACGT
TTCCGGGGCAACGTCTTCCAGCACGGCAGGGGCATCGGCGCGGTGTTTCGCACCATCCCCGGCGATGTGCCGGGACTGGC
CGCGCTCGGCATGGCGGATACCCTGGGGGCTCTGGCCGAGCTGCGACGCGGACTGGTGCTGGTGACGGGACCCACTGGTT
CGGGCAAGAGCACGACCCTGGCGGCGCTGGTCGATGTCATCAACGAGACGCGCCGCGAGCACATCCTGACCATCGAGGAT
CCGGTGGAGTTCGTGCATCACGGCAAGCGGTGCCTGGTCAGCCAGCGCGAGGTGTCGCGGGATACCCGGAGCTTCGCGGC
GGCCTTGCGCGGCGCGCTGCGCGAAGATCCCGATGTCATCATGGTCGGTGAAATGCGCGACCTGGAGACCATGCGGCTGG
CGCTGACTGCCGCCGAGACGGGGCACCTGGTACTGGGAACCCTGCATACGCTCTCGGCGGCCAAGACCATCGATCGCATC
ATCGATGCCTTCCCCGGCCCCGAACAGGGCATGGTGCGGGCGATGCTGTCGGAATCCCTGCAGGCGGTCGTCTCGCAGGT
GCTGTTGAAGCGCTGTGGGGGCGGGCGCGTGGCGGCTCATGAAGTCATGGTCGCCACACCGGCGGTGCGTAACCTGATTC
GCGAGGACAAGGTGGCGCAACTCCATTCGGTGCTGCAGACCGGCGCCGCCCAGGGCATGCAGACACTGGACGCGGCGCTG
GCGCGGCTGGTGGCCGAGGGTGTGGTGGCGCCTGACGAGGCGCAGTCGCGGGCGCGCGCTCCCCTGGGGCGGTGA
ATGAATATTACCGAACTGCTGGCAGCCTCGGCAAAGCGGGGCGCCTCCGATCTGCATCTGTCGGCAGGCATGGCACCGAT
GATGCGCGTCGACGGCGAGCTGGAAGCGCTCGATGGGCCGCCCGTCGATGACCCGACCTTGCGCAGAGAACTTCGAAGAC
TGCTCGGTGAGTCGCATTGGGCAACCTTCGAGTCCGAGCTGGAAGTCGACGTTGCCCTGGAGCTTCCCGGAGTGGCACGT
TTCCGGGGCAACGTCTTCCAGCACGGCAGGGGCATCGGCGCGGTGTTTCGCACCATCCCCGGCGATGTGCCGGGACTGGC
CGCGCTCGGCATGGCGGATACCCTGGGGGCTCTGGCCGAGCTGCGACGCGGACTGGTGCTGGTGACGGGACCCACTGGTT
CGGGCAAGAGCACGACCCTGGCGGCGCTGGTCGATGTCATCAACGAGACGCGCCGCGAGCACATCCTGACCATCGAGGAT
CCGGTGGAGTTCGTGCATCACGGCAAGCGGTGCCTGGTCAGCCAGCGCGAGGTGTCGCGGGATACCCGGAGCTTCGCGGC
GGCCTTGCGCGGCGCGCTGCGCGAAGATCCCGATGTCATCATGGTCGGTGAAATGCGCGACCTGGAGACCATGCGGCTGG
CGCTGACTGCCGCCGAGACGGGGCACCTGGTACTGGGAACCCTGCATACGCTCTCGGCGGCCAAGACCATCGATCGCATC
ATCGATGCCTTCCCCGGCCCCGAACAGGGCATGGTGCGGGCGATGCTGTCGGAATCCCTGCAGGCGGTCGTCTCGCAGGT
GCTGTTGAAGCGCTGTGGGGGCGGGCGCGTGGCGGCTCATGAAGTCATGGTCGCCACACCGGCGGTGCGTAACCTGATTC
GCGAGGACAAGGTGGCGCAACTCCATTCGGTGCTGCAGACCGGCGCCGCCCAGGGCATGCAGACACTGGACGCGGCGCTG
GCGCGGCTGGTGGCCGAGGGTGTGGTGGCGCCTGACGAGGCGCAGTCGCGGGCGCGCGCTCCCCTGGGGCGGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.