Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | L6431_RS04965 | Genome accession | NZ_AP025273 |
| Coordinates | 1093874..1094908 (+) | Length | 344 a.a. |
| NCBI ID | WP_021699006.1 | Uniprot ID | U2ZIR1 |
| Organism | Aquipseudomonas alcaligenes strain MRCP2 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1088874..1099908
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6431_RS04940 | - | 1089241..1091229 (-) | 1989 | WP_237045896.1 | dynamin-like GTPase family protein | - |
| L6431_RS04945 | - | 1091376..1091672 (-) | 297 | WP_061903059.1 | DUF167 domain-containing protein | - |
| L6431_RS04950 | - | 1091674..1092267 (-) | 594 | WP_021699009.1 | YggT family protein | - |
| L6431_RS04955 | proC | 1092277..1093095 (-) | 819 | WP_237045897.1 | pyrroline-5-carboxylate reductase | - |
| L6431_RS04960 | - | 1093109..1093801 (-) | 693 | WP_237045898.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| L6431_RS04965 | pilT | 1093874..1094908 (+) | 1035 | WP_021699006.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| L6431_RS04970 | pilU | 1094966..1096111 (+) | 1146 | WP_061903063.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| L6431_RS04975 | - | 1096065..1096949 (-) | 885 | WP_237045899.1 | TIGR03915 family putative DNA repair protein | - |
| L6431_RS04980 | - | 1096949..1098160 (-) | 1212 | WP_021699003.1 | putative DNA modification/repair radical SAM protein | - |
| L6431_RS04985 | - | 1098309..1098707 (+) | 399 | WP_021699002.1 | NINE protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38009.69 Da Isoelectric Point: 6.8889
>NTDB_id=90901 L6431_RS04965 WP_021699006.1 1093874..1094908(+) (pilT) [Aquipseudomonas alcaligenes strain MRCP2]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMDHKQVHALIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLSMEDLGMGEVFKKITDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNNKYHHILTIED
PIEFVHESKKCLVNQREVHRDTHGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLLKKVGGGRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDACL
KNLLSKGLVSRESAREKAKTPENF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMDHKQVHALIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLSMEDLGMGEVFKKITDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNNKYHHILTIED
PIEFVHESKKCLVNQREVHRDTHGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLLKKVGGGRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDACL
KNLLSKGLVSRESAREKAKTPENF
Nucleotide
Download Length: 1035 bp
>NTDB_id=90901 L6431_RS04965 WP_021699006.1 1093874..1094908(+) (pilT) [Aquipseudomonas alcaligenes strain MRCP2]
ATGGATATTACCGAGCTGCTCGCCTTCAGCGCCAAGCAGGGCGCGTCGGACCTGCACCTCTCGGCGGGCCTGCCGCCGAT
GATTCGCGTCGACGGTGACGTACGACGGATCAACCTGCCGCCGATGGACCACAAACAGGTCCACGCGTTGATCTACGACA
TCATGAACGACAAGCAGCGCAAGGATTACGAAGAGTTCCTCGAGACTGACTTCTCCTTCGAAGTGCCGGGCGTGGCGCGC
TTCCGGGTCAACGCCTTCAACCAGAACCGTGGCGCCGGCGCCGTGTTCCGGACCATTCCCTCCAAGGTCCTGAGCATGGA
AGACCTCGGCATGGGCGAGGTGTTCAAGAAGATCACCGATGTGCCGCGTGGCCTGGTGCTGGTCACCGGCCCGACCGGTT
CGGGCAAGTCGACTACCCTGGCGGCCATGCTCGACTACCTGAACAACAACAAGTATCACCACATCCTCACCATCGAAGAC
CCGATCGAATTCGTTCACGAGTCGAAGAAGTGCCTGGTCAACCAGCGCGAAGTACACCGCGACACCCACGGCTTCTCCGA
AGCTCTGCGCTCGGCACTGCGGGAAGACCCGGACATCATCCTGGTCGGTGAGATGCGTGACCTGGAGACCATCCGCCTGG
CGCTGACCGCCGCGGAAACCGGCCACCTGGTATTCGGCACCCTGCACACCACCTCCGCCGCCAAGACCATCGACCGCGTG
GTCGACGTGTTCCCGGCCGAGGAGAAATCCATGGTCCGTTCCATGCTGTCGGAGTCGCTGCAGGCGGTGATTTCGCAGAC
CCTGCTGAAGAAGGTCGGCGGCGGTCGGGTGGCGGCCCACGAGATCATGATCGGCACGCCGGCCATCCGTAACCTGATCC
GCGAGGACAAGGTGGCGCAGATGTACTCGGCGATCCAGACCGGCGGTTCGCTGGGCATGCAGACCCTCGACGCCTGCCTG
AAGAACCTGCTGAGCAAAGGCCTGGTCAGTCGCGAGTCCGCGCGCGAGAAGGCCAAGACGCCGGAAAACTTCTAA
ATGGATATTACCGAGCTGCTCGCCTTCAGCGCCAAGCAGGGCGCGTCGGACCTGCACCTCTCGGCGGGCCTGCCGCCGAT
GATTCGCGTCGACGGTGACGTACGACGGATCAACCTGCCGCCGATGGACCACAAACAGGTCCACGCGTTGATCTACGACA
TCATGAACGACAAGCAGCGCAAGGATTACGAAGAGTTCCTCGAGACTGACTTCTCCTTCGAAGTGCCGGGCGTGGCGCGC
TTCCGGGTCAACGCCTTCAACCAGAACCGTGGCGCCGGCGCCGTGTTCCGGACCATTCCCTCCAAGGTCCTGAGCATGGA
AGACCTCGGCATGGGCGAGGTGTTCAAGAAGATCACCGATGTGCCGCGTGGCCTGGTGCTGGTCACCGGCCCGACCGGTT
CGGGCAAGTCGACTACCCTGGCGGCCATGCTCGACTACCTGAACAACAACAAGTATCACCACATCCTCACCATCGAAGAC
CCGATCGAATTCGTTCACGAGTCGAAGAAGTGCCTGGTCAACCAGCGCGAAGTACACCGCGACACCCACGGCTTCTCCGA
AGCTCTGCGCTCGGCACTGCGGGAAGACCCGGACATCATCCTGGTCGGTGAGATGCGTGACCTGGAGACCATCCGCCTGG
CGCTGACCGCCGCGGAAACCGGCCACCTGGTATTCGGCACCCTGCACACCACCTCCGCCGCCAAGACCATCGACCGCGTG
GTCGACGTGTTCCCGGCCGAGGAGAAATCCATGGTCCGTTCCATGCTGTCGGAGTCGCTGCAGGCGGTGATTTCGCAGAC
CCTGCTGAAGAAGGTCGGCGGCGGTCGGGTGGCGGCCCACGAGATCATGATCGGCACGCCGGCCATCCGTAACCTGATCC
GCGAGGACAAGGTGGCGCAGATGTACTCGGCGATCCAGACCGGCGGTTCGCTGGGCATGCAGACCCTCGACGCCTGCCTG
AAGAACCTGCTGAGCAAAGGCCTGGTCAGTCGCGAGTCCGCGCGCGAGAAGGCCAAGACGCCGGAAAACTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas stutzeri DSM 10701 |
95.64 |
100 |
0.956 |
| pilT | Pseudomonas aeruginosa PAK |
93.895 |
100 |
0.939 |
| pilT | Acinetobacter nosocomialis M2 |
84.593 |
100 |
0.846 |
| pilT | Acinetobacter baumannii D1279779 |
84.302 |
100 |
0.843 |
| pilT | Acinetobacter baumannii strain A118 |
84.302 |
100 |
0.843 |
| pilT | Acinetobacter baylyi ADP1 |
82.267 |
100 |
0.823 |
| pilT | Legionella pneumophila strain Lp02 |
74.852 |
98.256 |
0.735 |
| pilT | Legionella pneumophila strain ERS1305867 |
74.852 |
98.256 |
0.735 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
69.139 |
97.965 |
0.677 |
| pilT | Vibrio cholerae strain A1552 |
69.139 |
97.965 |
0.677 |
| pilT | Neisseria meningitidis 8013 |
67.246 |
100 |
0.674 |
| pilT | Neisseria gonorrhoeae MS11 |
66.957 |
100 |
0.672 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.304 |
100 |
0.515 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.791 |
97.384 |
0.407 |
| pilU | Acinetobacter baylyi ADP1 |
39.306 |
100 |
0.395 |
| pilU | Vibrio cholerae strain A1552 |
39.13 |
100 |
0.392 |