Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | SIC19_RS06990 | Genome accession | NZ_CP138916 |
| Coordinates | 1500888..1501922 (-) | Length | 344 a.a. |
| NCBI ID | WP_027830795.1 | Uniprot ID | A0A1W6KE27 |
| Organism | Marinobacter sp. MIT930201 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1495888..1506922
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SIC19_RS06975 | - | 1497672..1498040 (+) | 369 | WP_041332636.1 | hypothetical protein | - |
| SIC19_RS06980 | - | 1498070..1499476 (-) | 1407 | WP_185906464.1 | OmpP1/FadL family transporter | - |
| SIC19_RS06985 | pilU | 1499592..1500713 (-) | 1122 | WP_041332635.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| SIC19_RS06990 | pilT | 1500888..1501922 (-) | 1035 | WP_027830795.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| SIC19_RS06995 | - | 1502068..1502760 (+) | 693 | WP_041332633.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| SIC19_RS07000 | proC | 1502844..1503677 (+) | 834 | WP_036203143.1 | pyrroline-5-carboxylate reductase | - |
| SIC19_RS07005 | - | 1503701..1504282 (+) | 582 | WP_036203140.1 | YggT family protein | - |
| SIC19_RS07010 | - | 1504526..1505287 (+) | 762 | Protein_1361 | dynamin family protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38131.99 Da Isoelectric Point: 6.4208
>NTDB_id=905856 SIC19_RS06990 WP_027830795.1 1500888..1501922(-) (pilT) [Marinobacter sp. MIT930201]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGSGAVFRTIPSKVLTMEDLGMGQVFKDIASVPRGLVLVTGPTGSGKSTTLAAMIDYINDSRYEHILTIED
PIEFVHESKKCLLNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSAIQTGGSLGMTTLDQCL
EKLLKKGLISREAARMKAKMPDNF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGSGAVFRTIPSKVLTMEDLGMGQVFKDIASVPRGLVLVTGPTGSGKSTTLAAMIDYINDSRYEHILTIED
PIEFVHESKKCLLNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSAIQTGGSLGMTTLDQCL
EKLLKKGLISREAARMKAKMPDNF
Nucleotide
Download Length: 1035 bp
>NTDB_id=905856 SIC19_RS06990 WP_027830795.1 1500888..1501922(-) (pilT) [Marinobacter sp. MIT930201]
ATGGATATTACTGAACTGCTTGCCTTTTCGGCCAAACAGGGCGCATCAGACTTGCACCTGTCTGCCGGCCTTCCCCCGAT
GATCCGTGTTGATGGCGATGTCCGCCGCATCAACCTTCCGCCAATGGAGCATAAAGAAGTCCATGGGCTGATCTACGACA
TCATGAACGACAAGCAGCGCAAGGACTACGAAGAGTTCCTGGAGACCGACTTCTCCTTCGAGGTGCCTGGTGTCGCCCGC
TTCCGTGTTAACGCGTTTAACCAGAACCGTGGCTCCGGTGCTGTCTTCCGGACCATCCCGTCAAAGGTACTGACGATGGA
AGACCTCGGTATGGGGCAGGTGTTCAAGGACATCGCCTCTGTGCCACGAGGTCTGGTGCTGGTTACGGGCCCAACAGGCT
CCGGTAAGTCCACCACCCTGGCGGCGATGATCGACTACATCAACGACAGCCGCTATGAGCACATCCTCACCATCGAGGAC
CCCATCGAATTCGTACACGAATCCAAGAAGTGCCTGCTGAACCAGCGGGAAGTGCATCGTGACACCCTGGGCTTCAACGA
AGCCCTGCGCTCCGCACTGCGGGAAGACCCGGACATTATCCTGGTCGGCGAGCTGCGGGACCTGGAAACCATCCGCCTGG
CCCTGACGGCGGCGGAAACCGGTCACCTGGTGTTCGGCACCCTGCACACCACCTCGGCGGCCAAAACCATCGACCGCGTG
GTGGACGTGTTCCCGGCGGAAGAGAAGTCCATGGTTCGGTCCATGTTGTCGGAATCATTGCAGGCGGTTATCTCCCAGAC
CCTGATGAAGAAAATGGGCGGCGGCCGGATTGCGGCACACGAAATCATGATTGGCACCTCGGCGATCCGAAACCTGATTC
GTGAAGACAAGATCGCGCAGATGTACTCGGCGATCCAGACCGGCGGTTCCCTGGGCATGACAACTCTGGATCAGTGCTTG
GAAAAACTCTTGAAGAAAGGCCTGATTTCCCGCGAAGCCGCGAGAATGAAAGCAAAAATGCCGGATAATTTCTAA
ATGGATATTACTGAACTGCTTGCCTTTTCGGCCAAACAGGGCGCATCAGACTTGCACCTGTCTGCCGGCCTTCCCCCGAT
GATCCGTGTTGATGGCGATGTCCGCCGCATCAACCTTCCGCCAATGGAGCATAAAGAAGTCCATGGGCTGATCTACGACA
TCATGAACGACAAGCAGCGCAAGGACTACGAAGAGTTCCTGGAGACCGACTTCTCCTTCGAGGTGCCTGGTGTCGCCCGC
TTCCGTGTTAACGCGTTTAACCAGAACCGTGGCTCCGGTGCTGTCTTCCGGACCATCCCGTCAAAGGTACTGACGATGGA
AGACCTCGGTATGGGGCAGGTGTTCAAGGACATCGCCTCTGTGCCACGAGGTCTGGTGCTGGTTACGGGCCCAACAGGCT
CCGGTAAGTCCACCACCCTGGCGGCGATGATCGACTACATCAACGACAGCCGCTATGAGCACATCCTCACCATCGAGGAC
CCCATCGAATTCGTACACGAATCCAAGAAGTGCCTGCTGAACCAGCGGGAAGTGCATCGTGACACCCTGGGCTTCAACGA
AGCCCTGCGCTCCGCACTGCGGGAAGACCCGGACATTATCCTGGTCGGCGAGCTGCGGGACCTGGAAACCATCCGCCTGG
CCCTGACGGCGGCGGAAACCGGTCACCTGGTGTTCGGCACCCTGCACACCACCTCGGCGGCCAAAACCATCGACCGCGTG
GTGGACGTGTTCCCGGCGGAAGAGAAGTCCATGGTTCGGTCCATGTTGTCGGAATCATTGCAGGCGGTTATCTCCCAGAC
CCTGATGAAGAAAATGGGCGGCGGCCGGATTGCGGCACACGAAATCATGATTGGCACCTCGGCGATCCGAAACCTGATTC
GTGAAGACAAGATCGCGCAGATGTACTCGGCGATCCAGACCGGCGGTTCCCTGGGCATGACAACTCTGGATCAGTGCTTG
GAAAAACTCTTGAAGAAAGGCCTGATTTCCCGCGAAGCCGCGAGAATGAAAGCAAAAATGCCGGATAATTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
89.244 |
100 |
0.892 |
| pilT | Pseudomonas stutzeri DSM 10701 |
88.953 |
100 |
0.89 |
| pilT | Acinetobacter nosocomialis M2 |
83.721 |
100 |
0.837 |
| pilT | Acinetobacter baumannii D1279779 |
83.721 |
100 |
0.837 |
| pilT | Acinetobacter baumannii strain A118 |
83.721 |
100 |
0.837 |
| pilT | Acinetobacter baylyi ADP1 |
81.686 |
100 |
0.817 |
| pilT | Legionella pneumophila strain Lp02 |
76.923 |
98.256 |
0.756 |
| pilT | Legionella pneumophila strain ERS1305867 |
76.923 |
98.256 |
0.756 |
| pilT | Neisseria gonorrhoeae MS11 |
68.235 |
98.837 |
0.674 |
| pilT | Neisseria meningitidis 8013 |
68.235 |
98.837 |
0.674 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
66.471 |
98.837 |
0.657 |
| pilT | Vibrio cholerae strain A1552 |
66.471 |
98.837 |
0.657 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.594 |
100 |
0.517 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.708 |
98.547 |
0.401 |
| pilU | Acinetobacter baylyi ADP1 |
39.595 |
100 |
0.398 |
| pilU | Vibrio cholerae strain A1552 |
39.701 |
97.384 |
0.387 |