Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | WHU12_RS04615 | Genome accession | NZ_CP148445 |
| Coordinates | 946978..947958 (+) | Length | 326 a.a. |
| NCBI ID | WP_001326494.1 | Uniprot ID | P52052 |
| Organism | Escherichia coli strain Z1323CEC0010 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 941978..952958
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHU12_RS04585 (WHU12_04585) | yggM | 942493..943500 (+) | 1008 | WP_000745210.1 | DUF1202 family protein | - |
| WHU12_RS04590 (WHU12_04590) | hemW | 943655..944791 (-) | 1137 | WP_000239943.1 | radical SAM family heme chaperone HemW | - |
| WHU12_RS04595 (WHU12_04595) | rdgB | 944784..945377 (-) | 594 | WP_001174777.1 | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | - |
| WHU12_RS04600 (WHU12_04600) | yggU | 945385..945675 (-) | 291 | WP_000994920.1 | DUF167 family protein YggU | - |
| WHU12_RS04605 (WHU12_04605) | yggT | 945672..946238 (-) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| WHU12_RS04610 (WHU12_04610) | yggS | 946256..946960 (-) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| WHU12_RS04615 (WHU12_04615) | pilT | 946978..947958 (+) | 981 | WP_001326494.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| WHU12_RS04620 (WHU12_04620) | ruvX | 948142..948558 (-) | 417 | WP_000017106.1 | Holliday junction resolvase RuvX | - |
| WHU12_RS04625 (WHU12_04625) | yqgE | 948558..949121 (-) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| WHU12_RS04630 (WHU12_04630) | gshB | 949230..950180 (-) | 951 | WP_000593273.1 | glutathione synthase | - |
| WHU12_RS04635 (WHU12_04635) | rsmE | 950193..950924 (-) | 732 | WP_001222509.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| WHU12_RS04640 (WHU12_04640) | endA | 951004..951711 (-) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| WHU12_RS04645 (WHU12_04645) | yggI | 951806..952303 (-) | 498 | WP_001300769.1 | SprT family zinc-dependent metalloprotease | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35994.16 Da Isoelectric Point: 6.0804
>NTDB_id=872095 WHU12_RS04615 WP_001326494.1 946978..947958(+) (pilT) [Escherichia coli strain Z1323CEC0010]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=872095 WHU12_RS04615 WP_001326494.1 946978..947958(+) (pilT) [Escherichia coli strain Z1323CEC0010]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGCAGAATGGAAGCTGCGCCGTTTGATACGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGTGGC
AGCGCATTCGCGCAACGGCATGGCATTTCGCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGCAGAATGGAAGCTGCGCCGTTTGATACGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGTGGC
AGCGCATTCGCGCAACGGCATGGCATTTCGCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
Similar proteins
Only experimentally validated proteins are listed.