Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | Q9G97_RS01745 | Genome accession | NZ_CP132194 |
| Coordinates | 398292..399329 (-) | Length | 345 a.a. |
| NCBI ID | WP_305900247.1 | Uniprot ID | - |
| Organism | Psychrobacter sp. M13 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 393292..404329
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q9G97_RS01720 (Q9G97_01720) | - | 393918..395048 (+) | 1131 | WP_305899482.1 | hypothetical protein | - |
| Q9G97_RS01725 (Q9G97_01725) | - | 395048..395395 (+) | 348 | WP_201571356.1 | RnfH family protein | - |
| Q9G97_RS01730 (Q9G97_01730) | - | 395435..395848 (-) | 414 | WP_305899483.1 | outer membrane protein assembly factor BamE | - |
| Q9G97_RS01735 (Q9G97_01735) | fur | 396211..396642 (+) | 432 | WP_305899484.1 | ferric iron uptake transcriptional regulator | - |
| Q9G97_RS01740 (Q9G97_01740) | pilU | 397074..398201 (-) | 1128 | WP_305899485.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| Q9G97_RS01745 (Q9G97_01745) | pilT | 398292..399329 (-) | 1038 | WP_305900247.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| Q9G97_RS01750 (Q9G97_01750) | - | 399571..400341 (+) | 771 | WP_371747919.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| Q9G97_RS01755 (Q9G97_01755) | - | 400378..401652 (-) | 1275 | WP_305899487.1 | hemolysin family protein | - |
| Q9G97_RS01760 (Q9G97_01760) | - | 401803..403476 (-) | 1674 | WP_305899488.1 | NAD+ synthase | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38379.14 Da Isoelectric Point: 6.8438
>NTDB_id=867541 Q9G97_RS01745 WP_305900247.1 398292..399329(-) (pilT) [Psychrobacter sp. M13]
MSIEDLLRFTVKHNASDLHISAGMPAIIRVDGEMTRINMPVMSHQTVHQLIYDIMNDKQRADFEEFFETDFSFEIPNLAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGEVFKRVSDFKRGVVLVTGPTGSGKSTTLAAMVDYINETRKEHILTIED
PIEFVHESKKSLINQREVHRDTLGFEPALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRV
IDVFPASEKSMIRAMLSESLQAVISQTLLPRKTGGRVAAHEIMLGTPAIRNLIRENKVAQMYSSIQTGAGEGMITLDQSL
KNLITKGTISKEVARPYAKQPDAFL
MSIEDLLRFTVKHNASDLHISAGMPAIIRVDGEMTRINMPVMSHQTVHQLIYDIMNDKQRADFEEFFETDFSFEIPNLAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGEVFKRVSDFKRGVVLVTGPTGSGKSTTLAAMVDYINETRKEHILTIED
PIEFVHESKKSLINQREVHRDTLGFEPALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRV
IDVFPASEKSMIRAMLSESLQAVISQTLLPRKTGGRVAAHEIMLGTPAIRNLIRENKVAQMYSSIQTGAGEGMITLDQSL
KNLITKGTISKEVARPYAKQPDAFL
Nucleotide
Download Length: 1038 bp
>NTDB_id=867541 Q9G97_RS01745 WP_305900247.1 398292..399329(-) (pilT) [Psychrobacter sp. M13]
TTGAGTATTGAAGATTTATTACGCTTTACGGTGAAGCATAACGCATCAGATTTGCATATCTCCGCAGGAATGCCCGCTAT
TATTCGCGTTGACGGTGAGATGACTCGTATCAACATGCCCGTGATGAGCCATCAGACCGTTCATCAGCTGATCTACGATA
TCATGAATGACAAGCAGCGCGCAGATTTTGAAGAGTTTTTTGAGACGGATTTTTCATTTGAGATTCCAAACTTAGCCCGT
TTTCGAGTGAATGCTTTTAATCAAAATCGTGGTGCTGGGGCAGTTTTTCGGACTATTCCCTCTAAAGTGCTCACTATGGA
GGACTTAGGCATGGGCGAAGTGTTTAAGCGCGTCTCTGACTTCAAACGCGGCGTGGTATTAGTCACAGGCCCTACTGGTT
CGGGTAAGTCCACTACCCTAGCGGCTATGGTGGATTATATTAACGAGACTCGTAAAGAGCATATTTTGACTATCGAAGAC
CCTATTGAATTCGTTCACGAATCCAAAAAGAGTTTGATTAATCAGCGTGAAGTGCACCGTGATACTCTAGGTTTTGAGCC
TGCTCTGCGCTCAGCATTACGTGAGGATCCAGACGTGATCTTAGTCGGCGAATTACGTGATCTTGAGACCATTCGTTTGG
CTCTGACCGCTGCTGAAACAGGACACTTAGTATTTGGCACTTTGCACACCAGCTCAGCGGCCAAAACGATTGACCGAGTC
ATTGATGTTTTTCCAGCCTCTGAGAAGTCTATGATTCGCGCTATGCTATCAGAATCACTGCAAGCCGTCATTTCACAAAC
CTTATTACCCCGTAAGACAGGTGGCCGAGTGGCTGCGCATGAGATCATGTTAGGCACGCCCGCCATTCGTAATTTGATCC
GCGAAAATAAAGTGGCACAGATGTATTCATCGATACAGACTGGTGCAGGTGAAGGGATGATTACTTTAGATCAGTCGCTC
AAGAATCTAATAACTAAAGGCACTATTAGTAAGGAAGTTGCTAGACCTTATGCCAAGCAACCAGATGCCTTTTTATAA
TTGAGTATTGAAGATTTATTACGCTTTACGGTGAAGCATAACGCATCAGATTTGCATATCTCCGCAGGAATGCCCGCTAT
TATTCGCGTTGACGGTGAGATGACTCGTATCAACATGCCCGTGATGAGCCATCAGACCGTTCATCAGCTGATCTACGATA
TCATGAATGACAAGCAGCGCGCAGATTTTGAAGAGTTTTTTGAGACGGATTTTTCATTTGAGATTCCAAACTTAGCCCGT
TTTCGAGTGAATGCTTTTAATCAAAATCGTGGTGCTGGGGCAGTTTTTCGGACTATTCCCTCTAAAGTGCTCACTATGGA
GGACTTAGGCATGGGCGAAGTGTTTAAGCGCGTCTCTGACTTCAAACGCGGCGTGGTATTAGTCACAGGCCCTACTGGTT
CGGGTAAGTCCACTACCCTAGCGGCTATGGTGGATTATATTAACGAGACTCGTAAAGAGCATATTTTGACTATCGAAGAC
CCTATTGAATTCGTTCACGAATCCAAAAAGAGTTTGATTAATCAGCGTGAAGTGCACCGTGATACTCTAGGTTTTGAGCC
TGCTCTGCGCTCAGCATTACGTGAGGATCCAGACGTGATCTTAGTCGGCGAATTACGTGATCTTGAGACCATTCGTTTGG
CTCTGACCGCTGCTGAAACAGGACACTTAGTATTTGGCACTTTGCACACCAGCTCAGCGGCCAAAACGATTGACCGAGTC
ATTGATGTTTTTCCAGCCTCTGAGAAGTCTATGATTCGCGCTATGCTATCAGAATCACTGCAAGCCGTCATTTCACAAAC
CTTATTACCCCGTAAGACAGGTGGCCGAGTGGCTGCGCATGAGATCATGTTAGGCACGCCCGCCATTCGTAATTTGATCC
GCGAAAATAAAGTGGCACAGATGTATTCATCGATACAGACTGGTGCAGGTGAAGGGATGATTACTTTAGATCAGTCGCTC
AAGAATCTAATAACTAAAGGCACTATTAGTAAGGAAGTTGCTAGACCTTATGCCAAGCAACCAGATGCCTTTTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
78.841 |
100 |
0.788 |
| pilT | Acinetobacter baumannii D1279779 |
78.841 |
100 |
0.788 |
| pilT | Acinetobacter baumannii strain A118 |
78.841 |
100 |
0.788 |
| pilT | Pseudomonas stutzeri DSM 10701 |
78.198 |
99.71 |
0.78 |
| pilT | Pseudomonas aeruginosa PAK |
78.198 |
99.71 |
0.78 |
| pilT | Acinetobacter baylyi ADP1 |
76.744 |
99.71 |
0.765 |
| pilT | Legionella pneumophila strain Lp02 |
71.221 |
99.71 |
0.71 |
| pilT | Legionella pneumophila strain ERS1305867 |
71.221 |
99.71 |
0.71 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
68.072 |
96.232 |
0.655 |
| pilT | Vibrio cholerae strain A1552 |
68.072 |
96.232 |
0.655 |
| pilT | Neisseria meningitidis 8013 |
64.058 |
100 |
0.641 |
| pilT | Neisseria gonorrhoeae MS11 |
63.478 |
100 |
0.635 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.304 |
100 |
0.513 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.888 |
98.261 |
0.412 |
| pilU | Acinetobacter baylyi ADP1 |
41.279 |
99.71 |
0.412 |
| pilU | Vibrio cholerae strain A1552 |
41.791 |
97.101 |
0.406 |