Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | NGH78_RS09485 | Genome accession | NZ_AP024620 |
| Coordinates | 1921600..1922619 (-) | Length | 339 a.a. |
| NCBI ID | WP_109207341.1 | Uniprot ID | - |
| Organism | Moorella sp. Hama-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1916600..1927619
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NGH78_RS09465 (hamaS1_18800) | - | 1918762..1919514 (-) | 753 | WP_109207343.1 | A24 family peptidase | - |
| NGH78_RS09470 (hamaS1_18810) | - | 1919521..1919922 (-) | 402 | WP_123059989.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| NGH78_RS09480 (hamaS1_18820) | - | 1920199..1921413 (-) | 1215 | WP_109207342.1 | type II secretion system F family protein | - |
| NGH78_RS09485 (hamaS1_18830) | pilT | 1921600..1922619 (-) | 1020 | WP_109207341.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| NGH78_RS09490 (hamaS1_18840) | pilF | 1922632..1924293 (-) | 1662 | WP_109207340.1 | GspE/PulE family protein | Machinery gene |
| NGH78_RS09495 (hamaS1_18850) | aroB | 1924547..1925638 (-) | 1092 | WP_109207339.1 | 3-dehydroquinate synthase | - |
| NGH78_RS09500 (hamaS1_18860) | - | 1925617..1926138 (-) | 522 | WP_109207338.1 | shikimate kinase | - |
| NGH78_RS09505 (hamaS1_18870) | aroC | 1926196..1927362 (-) | 1167 | WP_109207337.1 | chorismate synthase | - |
Sequence
Protein
Download Length: 339 a.a. Molecular weight: 36753.28 Da Isoelectric Point: 6.7818
>NTDB_id=86724 NGH78_RS09485 WP_109207341.1 1921600..1922619(-) (pilT) [Moorella sp. Hama-1]
MLDIKTILVAAAAAGASDVHLAVGLPPVFRINGELQVQHQWEPLDAGMAAGLVRPMVSERWEVFQEQGEIDLAYSLPGVS
RFRVNVFHQRGSTGAAIRLIPRAIPGLETLGLPPVVGELAERRHGLVLVTGPTGSGKSTTLAAMVDKINRERRCHIITLE
DPIEYLHQHRLSIVNQREVGSDTHSFARALRAALRQDPDVILVGEMRDLETIATAITAAETGHLVLATLHTSSAIQSIDR
IVDVFPPHQQGQIRIQLADTLEGVITQQLLPRADRAGRVAAVEILIATPAVRNLIREGKTHQIISSMQTGARYGMQTMDA
ALRQLTVEGVIAGAALNYD
MLDIKTILVAAAAAGASDVHLAVGLPPVFRINGELQVQHQWEPLDAGMAAGLVRPMVSERWEVFQEQGEIDLAYSLPGVS
RFRVNVFHQRGSTGAAIRLIPRAIPGLETLGLPPVVGELAERRHGLVLVTGPTGSGKSTTLAAMVDKINRERRCHIITLE
DPIEYLHQHRLSIVNQREVGSDTHSFARALRAALRQDPDVILVGEMRDLETIATAITAAETGHLVLATLHTSSAIQSIDR
IVDVFPPHQQGQIRIQLADTLEGVITQQLLPRADRAGRVAAVEILIATPAVRNLIREGKTHQIISSMQTGARYGMQTMDA
ALRQLTVEGVIAGAALNYD
Nucleotide
Download Length: 1020 bp
>NTDB_id=86724 NGH78_RS09485 WP_109207341.1 1921600..1922619(-) (pilT) [Moorella sp. Hama-1]
ATGCTCGATATAAAAACCATCCTGGTGGCCGCCGCCGCAGCCGGGGCTTCCGATGTCCATCTCGCTGTTGGCTTGCCGCC
GGTCTTCCGGATCAATGGTGAACTCCAGGTCCAGCACCAGTGGGAGCCCCTGGATGCCGGGATGGCCGCAGGCCTGGTAC
GGCCGATGGTGAGCGAGCGCTGGGAGGTATTTCAGGAGCAGGGCGAAATCGACCTGGCCTATTCCCTGCCCGGGGTAAGC
CGTTTCCGGGTCAACGTCTTTCACCAGCGGGGCAGCACCGGGGCTGCCATCCGCCTGATCCCCAGGGCGATCCCGGGCCT
GGAGACCTTAGGTTTACCGCCGGTGGTGGGGGAACTGGCGGAGCGCCGGCATGGCCTGGTCCTGGTCACGGGACCGACGG
GTAGCGGCAAGTCCACCACCCTGGCGGCCATGGTGGATAAAATCAACCGGGAACGCCGCTGCCATATCATTACCCTGGAG
GACCCCATTGAGTACCTGCACCAGCACCGGTTGAGCATCGTCAACCAGCGGGAGGTGGGTTCTGATACCCATTCCTTTGC
CCGGGCCCTGCGGGCCGCCCTGCGCCAGGACCCGGATGTCATCCTGGTGGGGGAAATGCGCGACCTGGAAACCATCGCCA
CGGCCATTACCGCCGCGGAAACCGGTCACCTGGTCCTGGCCACCCTCCATACCAGCAGCGCCATCCAGAGTATCGACCGC
ATCGTCGACGTCTTTCCGCCCCACCAGCAGGGCCAGATCCGCATCCAGCTGGCCGATACCCTGGAAGGGGTTATTACCCA
GCAGCTCTTGCCGCGAGCGGATAGGGCAGGCCGGGTCGCGGCAGTGGAGATTTTGATTGCTACCCCGGCAGTCAGAAACC
TCATCCGTGAAGGCAAGACCCACCAGATTATATCCAGCATGCAGACAGGGGCCCGTTACGGGATGCAGACCATGGATGCC
GCCCTGCGACAGCTCACGGTTGAGGGCGTAATTGCCGGCGCAGCATTAAATTATGATTAA
ATGCTCGATATAAAAACCATCCTGGTGGCCGCCGCCGCAGCCGGGGCTTCCGATGTCCATCTCGCTGTTGGCTTGCCGCC
GGTCTTCCGGATCAATGGTGAACTCCAGGTCCAGCACCAGTGGGAGCCCCTGGATGCCGGGATGGCCGCAGGCCTGGTAC
GGCCGATGGTGAGCGAGCGCTGGGAGGTATTTCAGGAGCAGGGCGAAATCGACCTGGCCTATTCCCTGCCCGGGGTAAGC
CGTTTCCGGGTCAACGTCTTTCACCAGCGGGGCAGCACCGGGGCTGCCATCCGCCTGATCCCCAGGGCGATCCCGGGCCT
GGAGACCTTAGGTTTACCGCCGGTGGTGGGGGAACTGGCGGAGCGCCGGCATGGCCTGGTCCTGGTCACGGGACCGACGG
GTAGCGGCAAGTCCACCACCCTGGCGGCCATGGTGGATAAAATCAACCGGGAACGCCGCTGCCATATCATTACCCTGGAG
GACCCCATTGAGTACCTGCACCAGCACCGGTTGAGCATCGTCAACCAGCGGGAGGTGGGTTCTGATACCCATTCCTTTGC
CCGGGCCCTGCGGGCCGCCCTGCGCCAGGACCCGGATGTCATCCTGGTGGGGGAAATGCGCGACCTGGAAACCATCGCCA
CGGCCATTACCGCCGCGGAAACCGGTCACCTGGTCCTGGCCACCCTCCATACCAGCAGCGCCATCCAGAGTATCGACCGC
ATCGTCGACGTCTTTCCGCCCCACCAGCAGGGCCAGATCCGCATCCAGCTGGCCGATACCCTGGAAGGGGTTATTACCCA
GCAGCTCTTGCCGCGAGCGGATAGGGCAGGCCGGGTCGCGGCAGTGGAGATTTTGATTGCTACCCCGGCAGTCAGAAACC
TCATCCGTGAAGGCAAGACCCACCAGATTATATCCAGCATGCAGACAGGGGCCCGTTACGGGATGCAGACCATGGATGCC
GCCCTGCGACAGCTCACGGTTGAGGGCGTAATTGCCGGCGCAGCATTAAATTATGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
60.923 |
95.87 |
0.584 |
| pilT | Vibrio cholerae strain A1552 |
50.909 |
97.345 |
0.496 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.909 |
97.345 |
0.496 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.301 |
97.935 |
0.493 |
| pilT | Pseudomonas aeruginosa PAK |
50 |
97.935 |
0.49 |
| pilT | Neisseria meningitidis 8013 |
50 |
97.935 |
0.49 |
| pilT | Acinetobacter baylyi ADP1 |
50.151 |
97.64 |
0.49 |
| pilT | Neisseria gonorrhoeae MS11 |
49.552 |
98.82 |
0.49 |
| pilT | Legionella pneumophila strain Lp02 |
48.246 |
100 |
0.487 |
| pilT | Legionella pneumophila strain ERS1305867 |
48.246 |
100 |
0.487 |
| pilT | Acinetobacter baumannii strain A118 |
49.699 |
97.935 |
0.487 |
| pilT | Acinetobacter nosocomialis M2 |
49.699 |
97.935 |
0.487 |
| pilT | Acinetobacter baumannii D1279779 |
49.699 |
97.935 |
0.487 |
| pilU | Pseudomonas stutzeri DSM 10701 |
43.505 |
97.64 |
0.425 |
| pilU | Vibrio cholerae strain A1552 |
44.969 |
93.805 |
0.422 |
| pilU | Acinetobacter baylyi ADP1 |
42.331 |
96.165 |
0.407 |