Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   Q3B96_RS13300 Genome accession   NZ_CP130465
Coordinates   2593263..2595569 (-) Length   768 a.a.
NCBI ID   WP_003184851.1    Uniprot ID   -
Organism   Bacillus licheniformis strain MGMM9     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2588263..2600569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3B96_RS13260 (Q3B96_13260) - 2588728..2589159 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  Q3B96_RS13265 (Q3B96_13265) - 2589159..2589500 (+) 342 WP_003184836.1 Na(+)/H(+) antiporter subunit C -
  Q3B96_RS13270 (Q3B96_13270) - 2589493..2590968 (+) 1476 WP_031314695.1 Na+/H+ antiporter subunit D -
  Q3B96_RS13275 (Q3B96_13275) - 2590974..2591450 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  Q3B96_RS13280 (Q3B96_13280) - 2591450..2591734 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  Q3B96_RS13285 (Q3B96_13285) mnhG 2591718..2592092 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  Q3B96_RS13290 (Q3B96_13290) - 2592132..2592521 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  Q3B96_RS13295 (Q3B96_13295) comA 2592538..2593176 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  Q3B96_RS13300 (Q3B96_13300) comP 2593263..2595569 (-) 2307 WP_003184851.1 ATP-binding protein Regulator
  Q3B96_RS13305 (Q3B96_13305) comX 2595592..2595756 (-) 165 WP_003184853.1 competence pheromone ComX -
  Q3B96_RS13310 (Q3B96_13310) - 2595765..2596646 (-) 882 WP_021837675.1 polyprenyl synthetase family protein -
  Q3B96_RS13315 (Q3B96_13315) degQ 2596835..2596975 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  Q3B96_RS13320 (Q3B96_13320) - 2597461..2597808 (+) 348 WP_231105863.1 SDR family oxidoreductase -
  Q3B96_RS13325 (Q3B96_13325) - 2597851..2599071 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88374.68 Da        Isoelectric Point: 6.8179

>NTDB_id=858366 Q3B96_RS13300 WP_003184851.1 2593263..2595569(-) (comP) [Bacillus licheniformis strain MGMM9]
MKFSLKLVSVTLVVITCIYTFFVIYLCYNNMFVGAYLAYNSKNQLVVDYVEEDSLADYTGLKAGDIILEVNNEKPSKKEP
KNKILADVRSLSIERNGKIITTDTRDTIISYDVLFTVLIPVVFYLLCMFCVFLILKSNKTNKQMSSFLLISFLIIISLAY
VSVGGVSRGDKFSRYLNLLTFLSVPASYYHFILQYFKEIGKKFFSNKILLLYALPFLNIVLEIFYDLTDFLEEGRPYVNL
FSFFIGIVLVFGVIIYGLIKYKHSEEIYFLKMLMLGNFLGVFPFVVFFVLPILIIGDYIYSAAVVAPCLLIIPFSLVYQF
ISNKTYDVEFLVGRLKYYGLLAIIPTIMLISAFKLIKYQTGDYYDLRFTIYIYLVMLGVFYLKEILDYRFRLKRFSEKYN
YQDSIFKFTQTIRTHSSLNQVLLELKQTILDVLIVSQAHVLKVKSDGTISLLEEDAEEYPWIPYEQEVTKVITDIGKIVE
VDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLENVKKEGPNPAWLNKLMF
AIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSAVIQTTRETCQELRPQLLYDLG
LVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSRANEVLIMLVCIKEKVVLHYEDDGI
GVDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMGL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=858366 Q3B96_RS13300 WP_003184851.1 2593263..2595569(-) (comP) [Bacillus licheniformis strain MGMM9]
ATGAAATTTTCATTGAAGTTAGTGTCAGTAACTCTTGTGGTGATTACCTGTATATATACTTTCTTTGTTATATATCTATG
TTATAACAACATGTTTGTAGGTGCATACTTAGCCTACAATTCGAAAAACCAGCTAGTTGTGGATTATGTTGAGGAAGATT
CCTTAGCCGATTATACGGGTTTAAAAGCTGGAGATATCATTCTTGAGGTTAATAATGAGAAGCCGTCTAAGAAGGAACCA
AAAAATAAAATTCTAGCAGATGTCCGTTCACTTTCTATTGAGAGAAATGGAAAAATCATTACAACTGATACAAGGGATAC
TATTATTAGTTATGATGTTTTATTTACTGTTTTAATCCCGGTTGTATTTTATTTATTATGCATGTTTTGTGTGTTTTTGA
TTTTAAAATCTAACAAGACGAATAAACAAATGTCTTCATTTTTGCTAATTTCATTTTTAATCATAATTTCACTGGCTTAT
GTAAGTGTCGGTGGAGTTTCAAGAGGTGATAAATTTAGCCGATATCTGAATTTGTTAACCTTTCTATCAGTACCTGCTAG
TTATTATCACTTTATACTTCAATATTTCAAAGAAATTGGCAAAAAATTCTTTAGCAATAAAATATTGTTGCTCTATGCTT
TACCTTTCTTGAATATCGTTTTAGAAATTTTTTATGACCTTACTGATTTTCTTGAGGAAGGTAGGCCATATGTCAATTTG
TTTTCGTTCTTTATAGGAATTGTTTTAGTTTTCGGAGTTATTATTTACGGTTTAATTAAATATAAGCATTCAGAGGAAAT
TTATTTCTTGAAAATGCTTATGTTAGGAAATTTCCTTGGTGTTTTTCCTTTTGTAGTATTCTTTGTTCTTCCAATTTTAA
TTATTGGGGATTATATTTATTCCGCCGCAGTAGTAGCTCCATGTCTATTGATCATTCCGTTTTCTTTAGTTTATCAATTC
ATATCTAATAAAACTTATGATGTGGAGTTTTTGGTTGGAAGATTAAAATACTATGGCCTATTGGCGATTATTCCAACAAT
TATGTTGATATCTGCTTTCAAGCTAATAAAGTATCAAACTGGGGACTACTATGATCTAAGATTCACAATCTATATCTACC
TGGTCATGCTCGGTGTTTTTTACCTTAAAGAAATCCTTGATTACCGCTTCCGTCTGAAACGTTTTTCAGAGAAGTATAAC
TACCAAGACAGTATATTTAAGTTCACACAAACGATTCGAACACACTCATCTTTAAATCAGGTTTTGTTGGAATTGAAACA
AACAATTCTCGATGTTTTGATTGTCAGCCAAGCCCATGTTCTGAAAGTCAAAAGCGACGGAACAATATCTTTGCTCGAAG
AAGATGCCGAAGAATATCCGTGGATCCCCTACGAACAAGAAGTAACCAAGGTCATCACCGACATCGGCAAAATCGTCGAA
GTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACGTCTTATGTCATGCTGTGTTTGTCGGTTTTAAATAC
GCCTAGGCTGACGCGCGATGAGATTTCATGGCTTGAGACGCTGGCGTTTTATACGAGCGTTTCCCTGGAAAACGTGCTGA
AAATCGGCGAGCTGATGGAGCATCTGGAAAATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTGAATAAATTGATGTTT
GCGATTGAAGAGAAGCAGAGATCTGATTTAGCCCGCGATCTCCACGACTCTGTCCTGCAGGATATGATTTCCTTGAAGCA
TCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCCGGCAAAGGCTCATCAATATGA
ATGAGCAAATGTCCGCCGTCATCCAGACGACAAGGGAAACGTGCCAGGAGCTGAGGCCGCAGCTGTTGTACGATCTCGGA
CTTGTCAAAGCCCTTTCGAAACTGGCGGCGCAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAATACGGAAAG
GTTCTCAAAGGTGCTCGACTTGGACACGCAGTTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATGCGGTTAAAC
ATTCGAGAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGATGACGGCATT
GGGGTTGACCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGCATTCGCGAGCGCGTCCGCGCACTGAA
CGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTTAGGGTCGCCATTGAAATGGGATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

52.516

100

0.53